Pairwise Alignments

Query, 392 a.a., D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 409 a.a., penicillin-binding protein 6. Serine peptidase. MEROPS family S11 from Paraburkholderia bryophila 376MFSha3.1

 Score =  347 bits (889), Expect = e-100
 Identities = 188/386 (48%), Positives = 260/386 (67%), Gaps = 17/386 (4%)

Query: 13  LSLGVAVPA-------LAQMPAPPEVAARAYLLLDATSGQVLASKDPDQAVEPASLTKLM 65
           L+LGV +PA        AQ+P PP V AR+++L+DATS QVLAS +PD+ VEPASLTKLM
Sbjct: 26  LTLGVVLPATLAASTAFAQVP-PPAVNARSWVLVDATSNQVLASGNPDERVEPASLTKLM 84

Query: 66  TAYLVFDALKAGKISLTQTFGVSE--RAWKMPGSRMFIDPKMQVPVEDLIKGMIVQSGND 123
           TAYLVF+AL+  KI++ QT   SE  R  +   SRMF++    V V DL+ GMIVQSGND
Sbjct: 85  TAYLVFEALQTKKIAMDQTVTPSEAVRRVRTDESRMFVEANKPVTVHDLVYGMIVQSGND 144

Query: 124 ATVALAEGVAGSVERFVQLMNEQAKALGMTSTSYRNVEGLTEAGHTTTARDLATLASRLM 183
           A +ALAE V GS  +FV +MN +A+ LGM +T + +V G+ +A H TTA DLA L++RL+
Sbjct: 145 AAIALAELVGGSEAQFVNMMNTEAQRLGMKNTHFADVNGMPDAQHYTTAGDLAVLSARLI 204

Query: 184 TDFPKYVPYYSIQRYRYPGTPAANDTNRNLLLFRDPSVDGLKTGHTNAAGYCLVATARRQ 243
            DFP Y   +S++ + Y         NRN LL+ DP+VDGLKTGHT AAGYCL+A+A+R 
Sbjct: 205 RDFPDYYNIFSVKEFTY---NKIKQPNRNRLLWIDPTVDGLKTGHTQAAGYCLIASAKRS 261

Query: 244 VPGLGEGAQGQRRLISVLLGASSENARAAESQKLLNWGYTAFDAVRLIPVGQPVATPRVW 303
           +PG  + +   RRL+SV++G + E+ R  +S K+LN+GY+A+D V L    Q V TPRV+
Sbjct: 262 LPGTQDAS---RRLVSVMMGETKEHDRVQDSLKMLNYGYSAYDTVCLYKASQVVGTPRVY 318

Query: 304 KGKADQVRLGRPEGVVVSVPAGEGAKLKSEVVRPDPLVAPLVKGQSVGTLRVTTAAGATV 363
           KG  D V++G      ++VP G   K+K ++ + DPL+AP+  GQ VGT ++  A G  +
Sbjct: 319 KGAQDSVQIGVKSDQYITVPKGMADKVKPQIEQMDPLIAPIANGQQVGTAKL-VADGKVL 377

Query: 364 AEIPLTVLDTVEESGVFGRAWDAIRL 389
           A+ P+  L  V ++GV GR WD++ L
Sbjct: 378 AQFPIVALQAVPQAGVVGRVWDSLML 403