Pairwise Alignments

Query, 392 a.a., D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 391 a.a., penicillin-binding protein 6 (RefSeq) from Shewanella sp. ANA-3

 Score =  240 bits (613), Expect = 4e-68
 Identities = 149/383 (38%), Positives = 210/383 (54%), Gaps = 22/383 (5%)

Query: 11  LCLSLGVAVPALAQMPA----PPEVAARAYLLLDATSGQVLASKDPDQAVEPASLTKLMT 66
           L L   V++P  A  P      P VAA+AY+L+D  SGQ++A ++  +++ PASLTK+MT
Sbjct: 12  LLLISSVSLPVYAAQPIVTPDAPTVAAKAYVLMDYYSGQIIAEENAYESLNPASLTKMMT 71

Query: 67  AYLVFDALKAGKISLTQTFGVSERAWKM---PGSRMFIDPKMQVPVEDLIKGMIVQSGND 123
           +Y++   +KAG +S      +S+ AW       S+MFI+    V V DL +G+I+QSGND
Sbjct: 72  SYVIGQEIKAGNVSPDDDVTISKNAWSKNFSDSSKMFIEVGKTVKVSDLNRGIIIQSGND 131

Query: 124 ATVALAEGVAGSVERFVQLMNEQAKALGMTSTSYRNVEGLTEAGHTTTARDLATLASRLM 183
           A VA+AE +AG+   FV +MN  AK LGM  + + N  GL    H +TA D+A L + L+
Sbjct: 132 ACVAMAEHIAGTEGAFVDMMNSWAKQLGMRDSYFENSHGLDSENHKSTAYDMALLGAALI 191

Query: 184 TDFPKYVPYYSIQRYRYPGTPAANDTNRNLLLF-RDPSVDGLKTGHTNAAGYCLVATARR 242
            D P+    YS + Y + G       NRN LL+    +VDG+KTGHT+ AGY LVA+A +
Sbjct: 192 RDVPEEYRVYSEKYYTFNG---IKQYNRNGLLWDNSMNVDGIKTGHTSGAGYNLVASATK 248

Query: 243 QVPGLGEGAQGQRRLISVLLGASSENARAAESQKLLNWGYTAFDAVRLIPVGQPVATPRV 302
                        RLISV++G  SE AR AES+KLL +G+  F+ V     G    T ++
Sbjct: 249 D----------GMRLISVVMGTQSEAARKAESKKLLTYGFRFFETVTPYKAGDSFVTQQI 298

Query: 303 WKGKADQVRLGRPEGVVVSVPAGEGAKLKSEVVRPDPLVAPLVKGQSVGTLRVTTAAGAT 362
           W G    V LG      +++  G    LK+      PL APL KG++VG L      G  
Sbjct: 299 WYGDKSTVDLGVATDTPITISRGRAKDLKANFELTKPLDAPLKKGETVGRL-YFQLDGKD 357

Query: 363 VAEIPLTVLDTVEESGVFGRAWD 385
           +A+ PL  L  V E   F +  D
Sbjct: 358 IAQFPLVTLQEVNEGSWFSKLVD 380