Pairwise Alignments

Query, 692 a.a., ATP-dependent DNA helicase Rep from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 672 a.a., DNA helicase, ATP-dependent, RepA type from Marinobacter adhaerens HP15

 Score =  493 bits (1270), Expect = e-144
 Identities = 288/657 (43%), Positives = 394/657 (59%), Gaps = 31/657 (4%)

Query: 5   LNIAQLEAVNHLAGPCLVLAGAGSGKTRVITHKIGRLI-QAGLAADRIAAITFTNKAAAE 63
           LN  Q EAV +  GP LVLAGAGSGKT VIT KI  LI Q G+    IAA+TFTNKAA E
Sbjct: 4   LNPRQSEAVRYADGPMLVLAGAGSGKTSVITRKIAYLIEQLGIPGRHIAAVTFTNKAARE 63

Query: 64  MRERAAQLVGRD-ARKVLICTFHALGVRLLRDDGEVLGLKKQFSILDTDDITSMLKDCGG 122
           M+ER  ++V R   R +++ TFH LG+ ++R++   LG    FSI D +D  ++L+D   
Sbjct: 64  MKERVGRIVDRKLTRGLIVSTFHNLGLNMIREEHTHLGYHPGFSIFDAEDAKALLQDLML 123

Query: 123 TTDTATA----RGWQWAISAWKGAGMNAAQCLAQAKDEDERVTATIMARYEERLVAYQSV 178
              +A A       Q  IS+WK A    A+ L++A DE E+  A I  +Y E L AY +V
Sbjct: 124 REASAEAGDELNDIQMTISSWKNAMRGPAEALSKAADEREQRIAIIYKKYNEYLKAYNAV 183

Query: 179 DFDDLITLPLKLLREHEDVRARWQKKMGHVLVDEYQDTNATQYELLKLLVGERGRFTAVG 238
           DFDDLI LP+ L R + DV A+W++K+ ++LVDEYQDTN  QYEL+K LV ER  FT VG
Sbjct: 184 DFDDLILLPVMLFRSNPDVLAKWRRKIRYMLVDEYQDTNVCQYELVKQLVAERAAFTVVG 243

Query: 239 DDDQSIYGWRGATLDNLKKLPQDYPELKVIKLEQNYRSTSAILRAANNVIGPNPKLFPKT 298
           DDDQSIY WRGA  +NL +L +D+P LK++KLEQNYRST+ ILR+AN VI  NP +F K 
Sbjct: 244 DDDQSIYAWRGARPENLAQLKEDFPSLKIVKLEQNYRSTARILRSANTVIANNPHVFEKA 303

Query: 299 LWSDLGEGEPVRVVDADNEEHEAERAVARILSLRASSQHKEWRDFAILYRANHMARPFEQ 358
           LWSD   GE +R+V   NE+ E +R    IL  +   +  ++RDFA+LYR NH AR  E 
Sbjct: 304 LWSDHTIGEEIRIVRCRNEDAETDRVATEILDQKL-KKGLDFRDFAVLYRGNHQARLLEM 362

Query: 359 SLRRAQVPYKVSGGQSFFDKAEIRDLCAWLRLLVNNNDDPAFLRSATTPKRGIGHTTLQQ 418
            L+  Q+PY++SGGQSFF K EI+D  ++LRLL+N +DD AFLR    P+R IG  TL+Q
Sbjct: 363 KLQAYQIPYRISGGQSFFSKNEIKDAMSYLRLLINPDDDAAFLRVVNVPRREIGPRTLEQ 422

Query: 419 LGAFATQYKLSLFEALFANSLGTALPPRAVATLHEFGRAVNDLEYRARHTLGHEAARAFL 478
           L  +A    +SLF+AL      T +  + +  L  F   V+    R    L  E     +
Sbjct: 423 LSHYARSRNVSLFKALGDMGAETHVTEKGLDRLRRFAHWVDATCER----LHSENPIPVI 478

Query: 479 TEWLKDIDYEKHLYDSEDNEKVAAARWTNVMDFCDWVAGRCGGKLEEEDGVKIETERKSL 538
            +   DI+YE+ L+      K A  R  N+    + +          +DG K   +   +
Sbjct: 479 KQLFTDIEYEEWLHQHSGTPKQAERRMENIWYLVESIQRML------DDG-KGTADELGI 531

Query: 539 LEVVQTIALLSTLSEREQ--DQNVVTLSTLHASKGLEWPHVMLVGVNEGLLPFKMEEEPG 596
            + +  + L   + +RE+  D + V L TLHASKGLE+PHV ++G+ E +LP +   E G
Sbjct: 532 EDAITKLILRDMMEQREEDDDSDKVQLLTLHASKGLEFPHVFIMGLEEEILPHRSSIEEG 591

Query: 597 QSDAQAADMAQRLQEERRLMYVGITRAQRTLAVSWLKRRKKGRESIPGLASRFIKEM 653
                       ++EERRLMYVGITRA+ TL +++   RK+  E +  + SRF+ E+
Sbjct: 592 -----------NIEEERRLMYVGITRARETLTLTYAATRKQYGEKLETIPSRFLDEL 637