Pairwise Alignments

Query, 192 a.a., Holliday junction DNA helicase RuvA from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 194 a.a., Holliday junction DNA helicase RuvA from Xanthomonas campestris pv. campestris strain 8004

 Score =  141 bits (356), Expect = 6e-39
 Identities = 80/192 (41%), Positives = 120/192 (62%), Gaps = 4/192 (2%)

Query: 1   MIGKLTGTLLEKNPPQILLDCHGVGYEVDVPMSTFYNLPAAGEKVALLTHFVVREDAQIL 60
           MIG+L G L  K PP +++D  GVGYE++ PMSTFY+LP  G  V L TH+  +ED+  L
Sbjct: 1   MIGRLRGILAYKQPPWLVIDVGGVGYELEAPMSTFYDLPDVGRDVILFTHYAQKEDSVSL 60

Query: 61  YGFGTAPEREAFRQLIKISGVGPRTALSVLSGMSVADLAQAVSAQESGRIVKVPGIGKKT 120
           YGF    ER  FR + K++G+G + AL+VLSG++V + A+ +++ +   + ++PGIGKKT
Sbjct: 61  YGFLREGERRLFRDVQKVTGIGAKIALAVLSGVTVDEFARLITSGDITALTRIPGIGKKT 120

Query: 121 AERLLLELKGKLGADLN--LPGAGPAQSDVQSDIQQALMALGYSDKDAT-AALKALPKDV 177
           AER+++EL+ +  AD +   P  G    D  S+   AL  LGY   +A   A +A  +  
Sbjct: 121 AERMVVELRDR-AADFSSGAPITGQLGPDAVSEATVALQQLGYKPAEAARMAREAGAEGD 179

Query: 178 GVSEGIKLALKA 189
            V+  I+ AL+A
Sbjct: 180 EVATVIRKALQA 191