Pairwise Alignments

Query, 192 a.a., Holliday junction DNA helicase RuvA from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 205 a.a., Holliday junction DNA helicase RuvA (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  162 bits (411), Expect = 3e-45
 Identities = 88/204 (43%), Positives = 127/204 (62%), Gaps = 14/204 (6%)

Query: 1   MIGKLTGTLLEKNPPQILLDCHGVGYEVDVPMSTFYNLPAAGEKVALLTHFVVREDAQIL 60
           MIG+L G L+EK  P++L+D +GVGYE+ +P+++FY LP   +   + THFVVREDAQ+L
Sbjct: 1   MIGRLRGVLIEKQAPEVLIDVNGVGYELQMPLTSFYELPELNQPTTVYTHFVVREDAQLL 60

Query: 61  YGFGTAPEREAFRQLIKISGVGPRTALSVLSGMSVADLAQAVSAQESGRIVKVPGIGKKT 120
           YGF T  ER  FR LIK +GVGP+ AL++LSGM+ ++    V   +   +VK+PG+GKKT
Sbjct: 61  YGFITKQERSLFRLLIKANGVGPKLALTILSGMTASEFVGCVERDDIVTLVKLPGVGKKT 120

Query: 121 AERLLLELKGKLGADLNLP-------------GAGPAQSDVQSDIQQALMALGYSDKDAT 167
           AERLL+E++ KL + +                   P  +  + D   AL++LGY    A+
Sbjct: 121 AERLLVEMRDKLKSLMEASVGSEREFVLQSNYSPAPVVNSAEEDAISALISLGYKPPQAS 180

Query: 168 AALKALPKDVGVSEG-IKLALKAL 190
            A+ A  K+   SE  IK ALK++
Sbjct: 181 KAVSAAFKEGMDSETLIKAALKSM 204