Pairwise Alignments

Query, 390 a.a., Flagellin protein flaA from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 485 a.a., Flagellin and related hook-associated proteins from Sphingomonas koreensis DSMZ 15582

 Score =  224 bits (571), Expect = 4e-63
 Identities = 175/487 (35%), Positives = 241/487 (49%), Gaps = 99/487 (20%)

Query: 1   MTTINTNVMSMTAQRNLGTTSSSLATSMQRLSSGLRVNSAKDDAAGLAISERMNAQVRGL 60
           MT I TN+ S+ A       SSSL T+M+RLS+G R+NSAKDDAAGLAI+ RM AQV+ +
Sbjct: 1   MTVIGTNIASLRAANASKMASSSLQTAMERLSTGKRINSAKDDAAGLAIASRMTAQVKSM 60

Query: 61  SVAARNANDGISLAQTAEGALGKVGDMLQRMRELAVQSANASNNSSDR-------TALQA 113
           +VA RNANDGISLAQTAEGALG+V +MLQRM+ELA Q++N + + SDR       T L A
Sbjct: 61  NVAIRNANDGISLAQTAEGALGEVTNMLQRMKELATQASNGTLSPSDRSTLQAEMTQLIA 120

Query: 114 EV------------------------------------TQLRSEIDR----------VAK 127
           EV                                    + L +  ++          V  
Sbjct: 121 EVGNISKTANFNGVSLLDGKTGDVTLQTGINAGETISMSMLNTSSEKLGLKVGVEGPVTG 180

Query: 128 TTSFNGTKL----LDGTFANATFQVGANAGEGIAIDSIVSANS-------TALGQLSATE 176
           T +  G K     ++GT+  A+     +A   IA D + + N+       TA  Q  AT 
Sbjct: 181 TVANTGIKKNELQINGTWIGASVDTNGDASSAIA-DKVTAINAKTSETGVTAAAQTKATL 239

Query: 177 HFVAAVA---------------APSTAANAAIPAGTAGW--------SIKNAAGVDVALG 213
             V A                 +    A+   P    G+        +I   +GV V   
Sbjct: 240 TMVGADKNTTGTLNINGKAIDLSDGAVADVTGPPAVPGYYDLELLVTAINGTSGVGVT-A 298

Query: 214 GIGASTTAAQRTTQVVDAINAKSADTGVFARETGAGAYEIFSSRDLTAATDFGAAFTAAA 273
            +  + TA + T+       A +AD   F       + ++  + D  A          AA
Sbjct: 299 ALNEAGTAIELTSAADVVFKADTADLAKFKVRAEGASADLAMTDDTDATVALNQVVLTAA 358

Query: 274 TGAP----GDTAPPGT--LTTLSA----INVNSFGDAQKALQVIDKAINSINSSRADLGA 323
            G      G+TA   +  LT  SA    +++ +  DA  A++VID A+  I++ R DLGA
Sbjct: 359 AGETIIVGGETAAMASIGLTATSAKGSDLSIATQDDASAAMKVIDDALTEISAGRGDLGA 418

Query: 324 LQSRFENAVANIQITGENISAARGRIVDADFAKETSNLSRAQILQQAGTAMVAQANQAQQ 383
           +Q+R E+ VAN+  T  N+S AR RI DADF+ ET+ L++AQIL QA TAM+AQANQ+QQ
Sbjct: 419 VQNRLESTVANLTTTTSNLSEARSRIEDADFSAETTALAKAQILSQASTAMLAQANQSQQ 478

Query: 384 GVLSLLR 390
            VLSLLR
Sbjct: 479 NVLSLLR 485