Pairwise Alignments

Query, 390 a.a., Flagellin protein flaA from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 362 a.a., flagellin from Herbaspirillum seropedicae SmR1

 Score =  285 bits (729), Expect = 1e-81
 Identities = 180/393 (45%), Positives = 235/393 (59%), Gaps = 37/393 (9%)

Query: 2   TTINTNVMSMTAQRNLGTTSSSLATSMQRLSSGLRVNSAKDDAAGLAISERMNAQVRGLS 61
           + INTN+ S+  QRNL  + SSL TS+QRLSSGLRVNSAKDDAAGLAI++RMN+QV+GL+
Sbjct: 3   SVINTNIPSLNTQRNLNASQSSLNTSIQRLSSGLRVNSAKDDAAGLAIADRMNSQVKGLA 62

Query: 62  VAARNANDGISLAQTAEGALGKVGDMLQRMRELAVQSANASNNSSDRTALQAEVTQLRSE 121
           VA RNANDGIS+AQTAEGAL  VGD LQRMRELAVQ+AN +N++ DR  L  E TQL  E
Sbjct: 63  VAQRNANDGISMAQTAEGALSTVGDNLQRMRELAVQAANGTNSAQDRKTLNDEYTQLSQE 122

Query: 122 IDRVAKTTSFNGTKLLDGTFANATFQVG---ANAGEGIAIDSIVSANSTALGQLSATEHF 178
           + RV   TSFNG  L  GT   A+   G   AN    + +   V AN   +      +  
Sbjct: 123 VFRVLNGTSFNGQNLFTGTGQGASAGTGSDSANVSASLTLSFQVGAN---VSDNKLNDQI 179

Query: 179 VAAVAAPSTAANAAIPAGTAGWSIKNAAGVDVALGGIGASTTAAQRTTQVVDAINAKSAD 238
              +   S     A   GT+            A G IG   T+   T Q     +AK+A 
Sbjct: 180 TITLDDLSNNGTMANVIGTS------------AKGLIGLGNTSGVSTAQAT-YTSAKAAL 226

Query: 239 TGVFARETGAGAYEIFSSR-DLTAATDFGAAFTAAATGAPGDTAPPGTLTTLSAINVNSF 297
             +FA  +   +  + SS   L A  D        A  AP                 ++ 
Sbjct: 227 DNLFATGSSLSSSALASSAVTLQATVDSAKLALDQAVAAP-----------------SAQ 269

Query: 298 GDAQKALQVIDKAINSINSSRADLGALQSRFENAVANIQITGENISAARGRIVDADFAKE 357
            DAQKA+Q +DKAI+ I+S RA+ GA+Q+RF   ++N+Q++ ENI+++R RI+D D+A+E
Sbjct: 270 SDAQKAIQNLDKAISLISSKRAEFGAVQNRFSAVISNLQVSSENITSSRSRIMDTDYAQE 329

Query: 358 TSNLSRAQILQQAGTAMVAQANQAQQGVLSLLR 390
           T+NL+RAQILQQAG AM++QAN A Q VLSLL+
Sbjct: 330 TANLTRAQILQQAGNAMLSQANSAPQQVLSLLK 362