Pairwise Alignments

Query, 734 a.a., General secretion pathway protein D from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 693 a.a., fimbrial protein from Pseudomonas fluorescens FW300-N2E3

 Score =  135 bits (340), Expect = 7e-36
 Identities = 88/311 (28%), Positives = 152/311 (48%), Gaps = 25/311 (8%)

Query: 355 AAVAASASPSTGGQIQADPATNSLIITAPEPQYRQLRAVIDQLDSRRAQVYVESLIAEVN 414
           +  +A A     G I  D  TN++I    + +  +LR ++ QLD    QV +E+ I E N
Sbjct: 392 SVTSAEAKVDERGSITVDERTNNIIAYQTQDRLDELRRIVAQLDIPVRQVMIEARIVEAN 451

Query: 415 AEKAAEFGIQWQGALGSSGDRVIGLLGTNFGTGGRNILELAQGNATPSPGMNLGLARRTN 474
            +     G++W G++ + G+      G + G    + +      +T SP +++G A  T+
Sbjct: 452 VDYDKSLGVRWGGSVRNKGNW--NASGVSNGANASSTIGTPGSTSTNSPFVDMGAAGNTS 509

Query: 475 GVYV--------LGFLARFLQENGEGNVLSTPNLLTLDNEEAKIVIGQNVPFVTGQFTNT 526
           G+ +        L      +++ G G ++S P ++T D E AKI+ G  +P+        
Sbjct: 510 GIGIAFITDNVLLDLELTAMEKTGNGEIVSQPKVVTSDKETAKILKGTEIPY-------- 561

Query: 527 GSGGNNGSVNPFQTIERKDVGLTLRVKPQISENGTIKMTIYQEVSNVVPSSVNSTTGLIT 586
                  S +   ++  K+  L+L V PQI+ +  I M +  +V+   P  +N    +  
Sbjct: 562 ----QEASSSGATSVAFKEASLSLEVTPQITPDNRIIMEV--KVTKDEPDYLNKVQDVPP 615

Query: 587 NKRT-IESTVLVEDGAVVVLGGLLQDEYAGNQEKVPGLGDVPIFGNLFRSETRSRKKTNL 645
            K+  + + VLV DG  +V+GG+  +  +   +KVP LGDVP  G LFR +  S KK+ L
Sbjct: 616 IKKNEVNAKVLVNDGETIVIGGVFSNTQSKVVDKVPFLGDVPYLGRLFRRDVVSEKKSEL 675

Query: 646 MVFLRPVVMRD 656
           +VFL P +M +
Sbjct: 676 LVFLTPRIMNN 686



 Score = 41.2 bits (95), Expect = 2e-07
 Identities = 37/172 (21%), Positives = 79/172 (45%), Gaps = 15/172 (8%)

Query: 42  AAANEPVTLNFVAAEIEAVARTMATITGRNVVVDPRVKGTVNLVTERPVTPTAALNQFAA 101
           A + E ++LNF   ++ +V + +A  T  N+V    V+G + L  +  V    AL+    
Sbjct: 272 AYSGEKLSLNFQDIDVRSVLQLIADFTNLNLVASDTVQGGITLRLQN-VPWDQALD---L 327

Query: 102 VLRLQGFSLVDTGGLYKIVP--EADAKLQGNVVSAGSVSALPASNTVVTQIFRLNHESAN 159
           VL+ +G      G +  + P  E  A+ +  + S   ++ L     +  ++ ++N+  A 
Sbjct: 328 VLKTKGLDKRKIGNVLLVAPADEIAARERQELESRKQIAELA---PLRRELLQVNYAKAA 384

Query: 160 NLVPVLRPL------IGPNNTINVNPGNNSLVITDYADNLQRIGRIIASLDV 205
           ++  + + +      +    +I V+   N+++     D L  + RI+A LD+
Sbjct: 385 DIAKLFQSVTSAEAKVDERGSITVDERTNNIIAYQTQDRLDELRRIVAQLDI 436