Pairwise Alignments

Query, 292 a.a., High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 294 a.a., inner-membrane translocator (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  203 bits (516), Expect = 4e-57
 Identities = 114/283 (40%), Positives = 175/283 (61%), Gaps = 4/283 (1%)

Query: 11  LMGQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAVLTWMGLNYLELNFWV 70
           L  Q+L GL  G    +++LGL +IFGLL+VIN +HG  + +GA    + L    +N+WV
Sbjct: 9   LAPQMLNGLALGVSVILVALGLTIIFGLLDVINMSHGEFYAVGAYGA-LALAAFGVNYWV 67

Query: 71  MIVLAPLLVGLLGVVIERLFLRWIY--RLDHLYGLLLTLGLTLMLEGVLRSAYGVSGLPY 128
           ++ + PL++  LG+V ER  +R +Y     H+  LLLT GL L+ E VL+  +G +    
Sbjct: 68  LMAMVPLMMIPLGIVTERYLIRRVYDGADRHVSTLLLTFGLGLIAEDVLKIIFGPNTQRP 127

Query: 129 SAPISGATNLGFMVMPNYRGFVVLASLVVCFATWYVIEKTKLGAYLRAGTENPRLVEAFG 188
             P+ GAT+L  + +P YR F++  S  V  A  +V+ +T+LGA +RA + +  +  + G
Sbjct: 128 ENPLPGATDLMGIFIPTYRLFLIAISAAVILAVAFVVYRTRLGAIVRAASFDRNMAASLG 187

Query: 189 INVPLMVTLTYGFGVALAGLAGVLAAPIMQVSPLMGQNLIIIVFAVVVIGGMGSILGTIL 248
           + V  + +  + FGVALAGLAGVL API  V P MG++ I+I F VV++GGMGSI G ++
Sbjct: 188 VRVGWVYSGAFAFGVALAGLAGVLLAPIYSVFPTMGRDFILIAFTVVIVGGMGSIWGAVV 247

Query: 249 TGLGLGIVEGLTK-VFYPEASSTVVFVIMAIVLLIRPAGLFGK 290
            G+ L  ++ ++  V  P  S  +VF +M +VL+ RP GLFG+
Sbjct: 248 AGIVLTQIQAISSLVISPVWSEPIVFGVMVLVLMFRPQGLFGR 290