Pairwise Alignments

Query, 292 a.a., High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 554 a.a., inner-membrane translocator (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  158 bits (399), Expect = 3e-43
 Identities = 103/283 (36%), Positives = 157/283 (55%), Gaps = 14/283 (4%)

Query: 18  GLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAVLTWMGLNYLELNF-----WVMI 72
           GL  GS   + ++GLA+ FG++ VIN AHG L M+GA  T+     +  +F     W ++
Sbjct: 265 GLSLGSVLLLAAIGLAITFGVMGVINMAHGELVMIGAYTTFFVQEIIRTSFPHLFDWSLL 324

Query: 73  VLAPL---LVGLLGVVIERLFLRWIYRLDHLYGLLLTLGLTLMLEGVLRSAYGVSGLPYS 129
           + APL   + G +GV IER  +R++Y    L  LL T G++L+L+  +RS +G +     
Sbjct: 325 IAAPLAFAVAGAVGVAIERGCVRFLYGRP-LETLLATWGISLILQQTVRSIFGPNNREVG 383

Query: 130 AP--ISGATNLGFMVMPNYRGFVVLASLVVCFATWYVIEKTKLGAYLRAGTENPRLVEAF 187
            P  +SGA  +G M +   R +++L +L V     +V++KT +G  +RA T+N  +    
Sbjct: 384 NPSWMSGAFEVGQMTITYNRLWILLFALAVFAVLLFVLKKTAIGLQMRAVTQNRAMAANM 443

Query: 188 GINVPLMVTLTYGFGVALAGLAGVLAAPIMQVSPLMGQNLIIIVFAVVVIGGMGSILGTI 247
           GI    +  +T+G G  +AGLAGV  + I  VSP +GQ+ I+  F VVV GG G+I GT+
Sbjct: 444 GIRTGWVDAMTFGLGAGIAGLAGVALSQIDNVSPNLGQSYIVDSFMVVVFGGAGNIWGTL 503

Query: 248 LTGLGLGIVEGLTKVFYPEASSTVVFVIMAIVLLI--RPAGLF 288
                LGI     +  Y  A    + V++ I+L I  RP GLF
Sbjct: 504 AAAFSLGIANKFLEP-YAGAVLAKILVLVFIILFIQKRPRGLF 545