Pairwise Alignments

Query, 439 a.a., Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 423 a.a., sugar ABC transporter substrate-binding protein from Bifidobacterium breve UCC2003

 Score = 57.8 bits (138), Expect = 6e-13
 Identities = 98/436 (22%), Positives = 168/436 (38%), Gaps = 37/436 (8%)

Query: 6   LPMTGALALAALLSGPVHAQAPTEIQWWHSMSAALGEWVNDLAKQYNASQS--QYKVVPT 63
           + + G LA     SG     A  + Q W+  +    ++   L  Q+         K V  
Sbjct: 15  IALVGGLAACGSSSGD--GTAELKFQTWNLKNEKFTDYFEGLIDQFEKENPGITIKWVDQ 72

Query: 64  YKGTYDESMTGAIAAFRAGNAPHILQVFEVGTATMMASKGAIVPAAKVLNDAGFKFDPTE 123
               Y++ ++   AA   G  P ++ +      T+ AS G ++  A  + +A   F P  
Sbjct: 73  PADNYEDKLSTDAAA---GELPDVVDMGPEPAYTL-ASAGILLNLADAVPEAEDDFLPAA 128

Query: 124 YVSAVAGYYTAPNGQM-LSYPLNSSTTIFYYNKDAFKKAGL--DPEKAPKTWPDVFAAAS 180
           + +A         G     + LNS  T  +YNK   ++ G+  DP   P    D+FA A 
Sbjct: 129 WDAATLKGTDLEEGTYGFPWYLNSGPT--FYNKAVLEECGITVDPNDPPTKQDDIFAMAD 186

Query: 181 KLKASGHACPFTTSWISWTQLESFSLWHNTLFASKNNGFDGNDAQLLINTPLHVRHFENL 240
              ++       TS I    ++ F ++   L    +  F  N+A+ +      V+H+ ++
Sbjct: 187 TFGSNCGGKYALTSGIP--SIQDFGMYGVELMNKDHTEFTFNNAKGVE----FVQHYIDM 240

Query: 241 AKASKEGSFVYKGRGNAPDASFPSGECAMITGSSGLYARVSKDA-KFAYGISTLPYYADV 299
             A      +     +    SF  G  A + G++     + K+A K    ++   + A+ 
Sbjct: 241 YNAGAFTDDMLNSSTSGESKSFNGGTQAFMNGNAYSVDDIRKNAPKVFENLAITDFIANT 300

Query: 300 KGAPQNTAIGGASLWVMAGKKPAEYKGVADFLNFLNDTRVQAASHQRTGYLPVTTGAYRL 359
           K       +    L V A  K  E      F  F+ ++  Q A  ++    P + G    
Sbjct: 301 K-----PNMFMEMLTVNATSKHQEE--AIKFARFVTNSDNQLAFDKKANVFPSSKG---- 349

Query: 360 TDASGFYNKNPGTDVAVTQMIRKATDKSRGIRLGNFVQIR----TIIDEETEQIWAGKKS 415
           T    F+N  P  D    + +R + D+ R   +    Q      T++ EE  Q   GK +
Sbjct: 350 TIDDKFFN--PSDDTMDAEAMRMSADQIRNGEIWGPAQFTSACSTMLREEIAQALQGKIT 407

Query: 416 PKEALDTAVVRGNEQL 431
            KEALD  V   NE+L
Sbjct: 408 AKEALDATVKYCNERL 423