Pairwise Alignments

Query, 325 a.a., dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 340 a.a., polysaccharide biosynthesis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  144 bits (363), Expect = 3e-39
 Identities = 101/329 (30%), Positives = 162/329 (49%), Gaps = 19/329 (5%)

Query: 4   LLTGAAGFIGMHTAQRLLARGDTVLGIDNLNDYYAVALKSAR-LEPLLKHPGFSFETVDV 62
           L+TG AGFIG +  ++LL    TV+G+DN        L   + L    +   FSF   D+
Sbjct: 19  LITGVAGFIGSNLLEQLLKLNQTVIGLDNFATGRQHNLDEVQSLVTSEQWMRFSFINGDI 78

Query: 63  ADRQAMARLFAGQRFDAVIHLAAQAGVRYSITNPTAYLDSNLTGFGHILEGCRSQKLGHL 122
            D      +  G   D V+H AA   V  SI +P     +N+TGF ++L+  +  ++   
Sbjct: 79  RDYAICEAVVNG--VDYVLHQAALGSVPRSIADPITTNAANITGFLNMLQAAKEAEVKSF 136

Query: 123 VYASSSSVYGGNTKMPFEETDAVDHPVSLYAATKKANELMAHTYSHLYGLPTTGLRFFTV 182
            YA+SSS YG +  +P  E + + +P+S YA TK  NEL A  Y+  YG  T GLR+F V
Sbjct: 137 TYAASSSTYGDHPALPKVEQN-IGNPLSPYAVTKYVNELYASVYARTYGFETIGLRYFNV 195

Query: 183 YGPWGRPDMAYFS----FTRAVLEGRPIQVFNHGKMKRDFTYIDDIVEGVLRVLDKPAAP 238
           +G    P+ AY +    +T ++++G  + +   G+  RDF YID++V+  + +L   AA 
Sbjct: 196 FGRRQDPNGAYAAVIPKWTSSMIKGEDVFINGDGETSRDFCYIDNVVQ--MNILAATAAS 253

Query: 239 ETAGGPPYRIFNIGNHDPVPLMDFIGCIEQALGREAIK-----EFLPMQDGDVPATYAST 293
           E        ++N+   D   L D    I+ +L    I       +   + GDV  + A  
Sbjct: 254 EAKN----EVYNVAVGDRTTLNDLYFAIKDSLNANGINVNQNPNYRDFRAGDVRHSQADV 309

Query: 294 EALHRWVGFAPSTPLKEGIARFVRWYREY 322
                 +G+  +  + EGI+  + WY+E+
Sbjct: 310 SKAVTRLGYQYTHKILEGISEAMPWYKEF 338