Pairwise Alignments

Query, 1039 a.a., Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 1045 a.a., heavy metal efflux pump, CzcA family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 1236 bits (3198), Expect = 0.0
 Identities = 606/1037 (58%), Positives = 812/1037 (78%), Gaps = 3/1037 (0%)

Query: 1    MIARLIHWSIANRFLVLLATLMLSAWGLVAMQRTPLDALPDLSDTQVIIRTTWPGQAPQI 60
            M+  +I  SI  RF+VL+  +M++ WG+  +++TPLDALPDLSD QVII+T +PGQAP++
Sbjct: 1    MLKYIIEASIRQRFMVLIIAIMITVWGVQELRKTPLDALPDLSDVQVIIKTPYPGQAPKL 60

Query: 61   VENQVTYPLTTTMLSVPGTKAVRGFSMFGDSFVYVLFDDNVDLYWARSRVLEYLNQVQAR 120
            VE QVTYPL+T ML+VPG K VRG+SMFGDS+VYV+F++  D+YWARSRVLEYL+Q+ +R
Sbjct: 61   VEEQVTYPLSTAMLAVPGAKTVRGYSMFGDSYVYVIFEEGTDIYWARSRVLEYLSQISSR 120

Query: 121  LPATARTSLGPDATGVGWIYQYALVDRTGQQDVAQLRALQDWFLRFELKTVPDVAEVASV 180
            LP   + SLGPDA+GVGW+++YALVDR+G  D++QL++LQDW+L+ EL++V  V+EVA+V
Sbjct: 121  LPQNVQPSLGPDASGVGWVFEYALVDRSGNLDLSQLKSLQDWYLKLELQSVAGVSEVATV 180

Query: 181  GGMVKQYQIVLDPDRLASYGITQKMVGEAVGRANQEAGGSVLELGEAEYAVRASGYLKTL 240
            GGM + YQIVL+PD++A Y +    + +A+ ++N E GGSV+E+ EAEY VRA GY +TL
Sbjct: 181  GGMEQTYQIVLEPDKMAIYKLDIASIKDAIEKSNSETGGSVIEMAEAEYMVRAKGYRQTL 240

Query: 241  DDFRAIPL-TTTPAGVSVRLGDVARVQTGPEMRRGIGELNGEGEAVGGVVVMRSGKNALR 299
            +DFR IPL  T+P+G  + L DVA V+ GP  RRGI EL+GEGE VGG+VVMR G+NAL 
Sbjct: 241  EDFREIPLGITSPSGTGLTLKDVATVRKGPASRRGIAELDGEGEVVGGIVVMRYGENALA 300

Query: 300  TIEAVKAKLAELQRSLPAGVEIVPVYDRSGLIERAVKNLGVKLVEEFIVVALVCVAFLFH 359
            TI+AVKAKL EL+  LP GVEI+P YDRS LI ++V NL  K+VEE +VV LVC+ FL H
Sbjct: 301  TIDAVKAKLEELKAGLPDGVEIIPTYDRSHLILKSVDNLFSKVVEEMLVVGLVCLLFLLH 360

Query: 360  FRSALVASVSLPLGVLIAFGVMQQQGINANVMSLGGIAIAIGAMVDAAIVMIENAHKHLE 419
             RS LVA ++LPL +LIAF VM + G+NAN+MSLGGIAIAIGA+VD AIVMIEN HKHLE
Sbjct: 361  ARSTLVAVITLPLSILIAFIVMNKMGVNANIMSLGGIAIAIGAVVDGAIVMIENLHKHLE 420

Query: 420  RWAHQHPGETLRGDAHWKVIATAAAEVGPALFFSLLIITLSFIPVFTLEAQEGRLFAPLA 479
             +   H  E    + HW+++  A+ EVGPALFFSL+IITLSF+PVF LEAQEGRLFAPLA
Sbjct: 421  HFKADHNREPDTKE-HWRIVTEASIEVGPALFFSLIIITLSFVPVFALEAQEGRLFAPLA 479

Query: 480  FTKTYAMAASAGLAVTLIPVLMGYLIRGRIPAETANPLNRALIALYRPVLDAVLKAPRLT 539
            +TKT+AMAA+A L++TL+P+LMGY IRG+IP+E +NP++R LIA+Y+P L  VLK P++T
Sbjct: 480  YTKTFAMAAAAFLSITLVPILMGYFIRGKIPSERSNPISRFLIAIYQPSLKLVLKFPKVT 539

Query: 540  LVVAALVLVASLWPLQHIGSEFMPPLDEGDLLYMPTALPGLSASKAAELLQQTDRLIKTV 599
            L++A + L ++ +P+  +GSEFMP L+EGDLLYMPTALPG+SASKAAE+LQQTDRLIKTV
Sbjct: 540  LMLALIALASAWYPMTRMGSEFMPTLEEGDLLYMPTALPGISASKAAEVLQQTDRLIKTV 599

Query: 600  PEVQSVYGKAGRADTATDPAPLEMFETTIQFKPREQWRAGLTPEALVEELDRTVRVPGLS 659
            PEV  V+GK GRA+TATDPAPL M ETTI  KP ++WR G+T + ++ +L +TV+VPGL+
Sbjct: 600  PEVARVFGKVGRAETATDPAPLTMLETTIMLKPHDEWREGMTLDGIIAQLQQTVKVPGLT 659

Query: 660  NIWVPPIRNRIDMLATGIKSPVGVKVAGADLATIDRLTRQIEQAVKDVPGVSSALAERLT 719
            N WV PI+ RIDML+TGIK+PVG+K+ GAD+  +  +  +IE  +  VP   SA AER  
Sbjct: 660  NAWVQPIKTRIDMLSTGIKTPVGIKITGADVNELQSIGTKIEAILSKVPHTKSAYAERSG 719

Query: 720  GGRYIDVDIRRADAARYGLNIADVQEIVAGSVGGMNIGETVEGLQRFPINLRYPRELRDS 779
            GGRYID+  +   AARYG+ + D+Q++V  ++GGM+IGE+V+G +R+PINLRYPRELRD+
Sbjct: 720  GGRYIDISPKLDVAARYGMTLQDIQDVVRYAIGGMDIGESVQGAERYPINLRYPRELRDN 779

Query: 780  LPKLRALPIVTPTGQRLVLSDVADLRISDGPPMLRSENARLAGFVYVDIRGRDLRGAVLD 839
            + KLR LP++T +G  L L ++AD+ I+DG PML+SEN RL  +V++DI G  +   +  
Sbjct: 780  IEKLRELPVITKSGHYLPLRNLADIEINDGAPMLKSENGRLISWVFIDIEGTSIGEYIAT 839

Query: 840  MQRAVATAVELPAGYSVSWSGQFEFLERATAKLQLVVPFTLLIIFVLLYLIFRRFDEALL 899
             + A+   + +P  YS S++GQ+E+++R  AKL+ V+P  L +IF+LL + F    +A +
Sbjct: 840  AKTALDAELVVPPRYSYSFAGQYEYMQRVDAKLKQVIPMALAVIFILLMMTFGSTIQASI 899

Query: 900  IMATLPFALVGGVWLLWLLGHHLSVASAVGFIALAGVAAEFGVIMLLYLKHAWRDRLDA- 958
            IM +LPFALVG  WLL+LL +++SVA AVG IALAGVAAEFGV+ML+YL +A + R +  
Sbjct: 900  IMLSLPFALVGSTWLLYLLDYNISVAVAVGMIALAGVAAEFGVVMLVYLNNAIKHRQEKD 959

Query: 959  GLDGDASLLDAIREGAVLRVRPKAMTVATIVAGLLPLFWGLGTGSEVMQRIAAPMVGGMI 1018
                 + L +A+ EGAV+R+RPKAMTVATI  GLLP+ WG G+G++VMQ+IAAPMVGGM+
Sbjct: 960  NYHSVSDLKEALMEGAVMRIRPKAMTVATIFFGLLPIMWGAGSGNDVMQKIAAPMVGGMV 1019

Query: 1019 SAPLLSLFVVPVAYRLM 1035
            +APLLSLF++P  Y L+
Sbjct: 1020 TAPLLSLFLLPALYLLI 1036