Pairwise Alignments

Query, 1039 a.a., Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 1045 a.a., heavy metal efflux pump, CzcA family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 1247 bits (3226), Expect = 0.0
 Identities = 615/1037 (59%), Positives = 814/1037 (78%), Gaps = 3/1037 (0%)

Query: 1    MIARLIHWSIANRFLVLLATLMLSAWGLVAMQRTPLDALPDLSDTQVIIRTTWPGQAPQI 60
            M+  +I  SI  R +VL+  +M++ WG+  +++TPLDALPDLSD QVII+TT+PGQAP++
Sbjct: 1    MLKYIIEASIRQRLMVLIIAMMITLWGVQELRKTPLDALPDLSDVQVIIKTTYPGQAPKL 60

Query: 61   VENQVTYPLTTTMLSVPGTKAVRGFSMFGDSFVYVLFDDNVDLYWARSRVLEYLNQVQAR 120
            VE QVTYPL+T ML+VPG K VRGFSMFGDS+VYV+FDD  D+YWARSRVLEYL+Q+ +R
Sbjct: 61   VEEQVTYPLSTAMLAVPGAKTVRGFSMFGDSYVYVIFDDGTDIYWARSRVLEYLSQIGSR 120

Query: 121  LPATARTSLGPDATGVGWIYQYALVDRTGQQDVAQLRALQDWFLRFELKTVPDVAEVASV 180
            LPA  + SLGPDA+GVGW+++YALVDR+G  D++QL++LQDW+L+ EL++V  V+EVA+V
Sbjct: 121  LPAGVQPSLGPDASGVGWVFEYALVDRSGNLDLSQLKSLQDWYLKLELQSVAGVSEVATV 180

Query: 181  GGMVKQYQIVLDPDRLASYGITQKMVGEAVGRANQEAGGSVLELGEAEYAVRASGYLKTL 240
            GGM + YQ+VL+PD++A Y +    + +A+ ++N EAGGSV+E+ EAEY VRA GY +TL
Sbjct: 181  GGMEQTYQVVLEPDKMAIYKLDIASIKDAIEKSNSEAGGSVVEMAEAEYMVRAKGYRQTL 240

Query: 241  DDFRAIPL-TTTPAGVSVRLGDVARVQTGPEMRRGIGELNGEGEAVGGVVVMRSGKNALR 299
            +DFR IPL   +P+G S+ L DVA ++ GP  RRGI EL+GEGE VGG++VMR G+NAL 
Sbjct: 241  EDFREIPLGIASPSGTSLTLKDVATIRKGPAARRGIAELDGEGEVVGGIIVMRYGENALS 300

Query: 300  TIEAVKAKLAELQRSLPAGVEIVPVYDRSGLIERAVKNLGVKLVEEFIVVALVCVAFLFH 359
            TI+AVKAKL EL   LP GVEIVP YDRS LI ++V NL  K+VEE +VV LVC+ FL H
Sbjct: 301  TIDAVKAKLEELSAGLPEGVEIVPTYDRSNLILKSVDNLFNKVVEEMLVVGLVCLLFLLH 360

Query: 360  FRSALVASVSLPLGVLIAFGVMQQQGINANVMSLGGIAIAIGAMVDAAIVMIENAHKHLE 419
             RS LVA V+LPL +LIAF VM + G+NAN+MSLGGIAIAIGA+VD AIVMIEN HKHLE
Sbjct: 361  ARSTLVAIVTLPLSILIAFIVMNKLGVNANIMSLGGIAIAIGAVVDGAIVMIENLHKHLE 420

Query: 420  RWAHQHPGETLRGDAHWKVIATAAAEVGPALFFSLLIITLSFIPVFTLEAQEGRLFAPLA 479
            ++  +H  E      HW+++  A+ EVGPALFFSLLIITLSF+PVF LEAQEGRLFAPLA
Sbjct: 421  QFHSEHQREP-NVKEHWRIVTQASTEVGPALFFSLLIITLSFVPVFALEAQEGRLFAPLA 479

Query: 480  FTKTYAMAASAGLAVTLIPVLMGYLIRGRIPAETANPLNRALIALYRPVLDAVLKAPRLT 539
            +TK++AMAASA LA+TL+PVLMGY IRG+IP+E  NP++R LIALY+P L+ VL  P++T
Sbjct: 480  YTKSFAMAASAILAITLVPVLMGYFIRGKIPSENKNPISRVLIALYKPALNLVLNFPKIT 539

Query: 540  LVVAALVLVASLWPLQHIGSEFMPPLDEGDLLYMPTALPGLSASKAAELLQQTDRLIKTV 599
            + +A L LV++ +P   +GSEFMP L+EGDLLYMPTALPG+SASKAAE+LQQTDRLIKTV
Sbjct: 540  IALALLALVSAWYPFTRMGSEFMPELEEGDLLYMPTALPGISASKAAEVLQQTDRLIKTV 599

Query: 600  PEVQSVYGKAGRADTATDPAPLEMFETTIQFKPREQWRAGLTPEALVEELDRTVRVPGLS 659
            PEV  V+GK GRA+TATDPAPL M ETTI  KP E+WR G+T + ++ +L +TV+VPGL+
Sbjct: 600  PEVARVFGKVGRAETATDPAPLTMLETTIMLKPHEEWREGMTLDGIINQLQQTVKVPGLT 659

Query: 660  NIWVPPIRNRIDMLATGIKSPVGVKVAGADLATIDRLTRQIEQAVKDVPGVSSALAERLT 719
            N WV PI+ RIDML+TGIK+PVG+K+ GAD+  + +L  QIE  +  +P   SA AER +
Sbjct: 660  NAWVQPIKTRIDMLSTGIKTPVGIKITGADVNELQQLGTQIEAILSRMPHTKSAYAERTS 719

Query: 720  GGRYIDVDIRRADAARYGLNIADVQEIVAGSVGGMNIGETVEGLQRFPINLRYPRELRDS 779
            GGRYID+  +   AARYG+N+ D+Q++V  ++GGM+IG++V+G +R+PINLRYPRELRD+
Sbjct: 720  GGRYIDITPKLDVAARYGMNLQDIQDVVRYAIGGMDIGQSVQGAERYPINLRYPRELRDN 779

Query: 780  LPKLRALPIVTPTGQRLVLSDVADLRISDGPPMLRSENARLAGFVYVDIRGRDLRGAVLD 839
            + KLR LP++T +G  L L ++A++ I++G PML SEN RL  +V+++I G  +   +  
Sbjct: 780  IEKLRELPVITKSGNYLPLRNLAEIEITEGAPMLASENGRLISWVFIEIEGTSIGEYITS 839

Query: 840  MQRAVATAVELPAGYSVSWSGQFEFLERATAKLQLVVPFTLLIIFVLLYLIFRRFDEALL 899
             ++ ++  + +P  YS S++GQ+E+++R  AKL+ V+P  L +IF+LL L F    +A +
Sbjct: 840  AKQTLSAELNVPPRYSYSFAGQYEYMQRVDAKLKQVIPMALGVIFILLMLTFGSTMQASM 899

Query: 900  IMATLPFALVGGVWLLWLLGHHLSVASAVGFIALAGVAAEFGVIMLLYLKHAWRDRLDAG 959
            IM +LPFALVG  WLL+LL +++SVA AVG IALAGVAAEFGVIML+YL +A + R D  
Sbjct: 900  IMLSLPFALVGSTWLLYLLDYNISVAVAVGMIALAGVAAEFGVIMLVYLNNAIKHRQDNN 959

Query: 960  -LDGDASLLDAIREGAVLRVRPKAMTVATIVAGLLPLFWGLGTGSEVMQRIAAPMVGGMI 1018
                   L +A+ EGAV+R+RPKAMTVATI  GLLP+ WG G+G++VMQ+IAAPMVGGM+
Sbjct: 960  TYHSVEDLKEALIEGAVMRIRPKAMTVATIFFGLLPIMWGAGSGNDVMQKIAAPMVGGMV 1019

Query: 1019 SAPLLSLFVVPVAYRLM 1035
            +AP+LSLFV+P  Y L+
Sbjct: 1020 TAPILSLFVLPALYLLV 1036