Pairwise Alignments

Query, 494 a.a., Aerotaxis sensor receptor protein from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 512 a.a., chemotaxis protein from Herbaspirillum seropedicae SmR1

 Score =  436 bits (1120), Expect = e-126
 Identities = 237/494 (47%), Positives = 328/494 (66%), Gaps = 3/494 (0%)

Query: 1   MSTTDTQSHITYANDAFVAVSGYSREEIESQPHNLVRHPDMPVEAFKDMWATLQGGEPWT 60
           MS+TDT S +TYAN +FV VSG+ RE++  QPHN+VRHPDMP EAF DMWATL+ G+ WT
Sbjct: 20  MSSTDTSSVLTYANSSFVEVSGFHREQLIGQPHNIVRHPDMPREAFADMWATLRRGDAWT 79

Query: 61  GLVKNRRENGDHYWVRANATPVKRDGVITGYMSVRTKPSQEEVASANALYAKFRNGQAGD 120
            +VKNRR +G HYWVRAN TP++R G ITG++SVRT+P+  E+ +A ALY +FR G+A  
Sbjct: 80  AVVKNRRADGRHYWVRANVTPIRRGGGITGFLSVRTQPAPHEIRAAAALYRRFREGRARG 139

Query: 121 LGFRKGLISRTGMMRWMSIMQAISAEARSNIGLSIATLLVGTGAWHAGLAGTALAQFLAL 180
           L F  GL+ R+G++ W  + Q +    R  + L+   L    G     LAG  LA   A 
Sbjct: 140 LRFCHGLVVRSGLLGWTRLEQVLPVRWRLRLALAAGGLTALAGGI---LAGAPLAPMAAS 196

Query: 181 LTVSMLLASLWMRYQIYKPLAQLREHALRLATGDFHSATHMNRIDEIGMTMRAVGQLGLM 240
           +   + LA LW+  ++  PL  + + A  +A G       ++RIDEIG+ +RAV Q GL 
Sbjct: 197 VLPPLALACLWLERRLAAPLELVLQQAKAVACGQPAQTQGLDRIDEIGLLLRAVNQSGLN 256

Query: 241 FRWVIDDVREQVLNAKIAASEIAQGNNDLSSRTEQAAASVEQTAASMEEMSAIVKNNAET 300
            R +IDDV  QV   + A+ +IA  N DL  RT    A ++QTA++ E+M+  V+++A++
Sbjct: 257 LRALIDDVAAQVQGLEQASRQIASDNADLRQRTADTHAQLQQTASAAEQMATAVRHSADS 316

Query: 301 SQQAAKLSSSASEAADKGGRAVADVIHTMNDIAHSSNKIGDIIGVIDSIAFQTNILALNA 360
           +Q A   +   S+AA +G   V  V+ TM+ IA +S +IG+I G+IDSIAFQTNILALNA
Sbjct: 317 AQAAHAQARQTSQAAAQGRDIVTQVVQTMHQIADASGRIGEINGLIDSIAFQTNILALNA 376

Query: 361 AVEAARAGAQGRGFAVVAAEVRSLAHRSAEAAKEIKSLIGASVEKVNAGSLMVDGAGRTM 420
           AVEAARAG  GRGFAVVAAEVR+LA RSA AA+EIK+LI  SV +  AG+   + A   +
Sbjct: 377 AVEAARAGEAGRGFAVVAAEVRTLAQRSASAAREIKALIAHSVGQSQAGAQRAEQAAAAI 436

Query: 421 KEIVVEVNRVSHMIAEISTATREQSDGITQVATAVGHLDQVTQQNAALVEQSTAASESLR 480
           + IV +   +S +I  IST+  EQS G++QV+ +   LD +TQQNAA+VE S AA  +++
Sbjct: 437 ESIVAQAQDMSTLIGAISTSAVEQSQGVSQVSQSALMLDGMTQQNAAMVEHSAAAVAAMQ 496

Query: 481 TQMELLVKAVNVFK 494
            +M+ L +AV VF+
Sbjct: 497 QRMQTLQQAVAVFE 510