Pairwise Alignments

Query, 494 a.a., Aerotaxis sensor receptor protein from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 523 a.a., chemotaxis protein from Herbaspirillum seropedicae SmR1

 Score =  417 bits (1073), Expect = e-121
 Identities = 235/501 (46%), Positives = 323/501 (64%), Gaps = 7/501 (1%)

Query: 1   MSTTDTQSHITYANDAFVAVSGYSREEIESQPHNLVRHPDMPVEAFKDMWATLQGGEPWT 60
           +S TD Q +I Y N  F+ +SG+  EE+   P N+VRHP+MP EAF DMWATL+ G PW 
Sbjct: 21  VSKTDLQGNILYVNPYFIEISGFEEEELIGAPQNIVRHPEMPREAFADMWATLKEGLPWN 80

Query: 61  GLVKNRRENGDHYWVRANATPVKRDGVITGYMSVRTKPSQEEVASANALYAKFRNGQAGD 120
           GLVKNR +NGD+YWV+AN TPV+ +G   GYMSVRT+PS+E+V +A A Y KF  GQA  
Sbjct: 81  GLVKNRCKNGDYYWVQANVTPVRENGRAVGYMSVRTRPSREQVQAAEAAYRKFSAGQARG 140

Query: 121 LGFRKGLISRTGMMRWMSIMQAISAEARSNIGLSIATLLVGTGAWHAGLA-----GTALA 175
           L   +G + RTG+  W+  ++ +    R    + + TL+   G   AG A     G+  A
Sbjct: 141 LRVHRGAVVRTGLTGWLQGLRELPVARRLGWTMGVLTLMFILGGAVAGNAVMSAGGSPFA 200

Query: 176 QFLALLTVSMLLASLW--MRYQIYKPLAQLREHALRLATGDFHSATHMNRIDEIGMTMRA 233
            +L     +++L + W  +   I  PL +  +    LA GD  S        ++G+ ++A
Sbjct: 201 VWLGTAAGALMLLASWAMLHASIVAPLQRAIKAVHGLAGGDLDSHIDTTARGDMGLLLQA 260

Query: 234 VGQLGLMFRWVIDDVREQVLNAKIAASEIAQGNNDLSSRTEQAAASVEQTAASMEEMSAI 293
           + QL +  R +I DVR  V +  I+  EIA GN DLS RTE  A+++E+TA+S+EE +A 
Sbjct: 261 LQQLNVNLRAIIGDVRRNVESMTISTGEIANGNMDLSGRTEAQASALEETASSVEEFAAT 320

Query: 294 VKNNAETSQQAAKLSSSASEAADKGGRAVADVIHTMNDIAHSSNKIGDIIGVIDSIAFQT 353
           V+ NA+++  A + + SAS  A +GG +V  +  TM +I  +S+KI DIIG+ID I+FQT
Sbjct: 321 VRQNADSAANADRQAQSASAIAQRGGSSVQRMGRTMEEIDAASHKIVDIIGLIDGISFQT 380

Query: 354 NILALNAAVEAARAGAQGRGFAVVAAEVRSLAHRSAEAAKEIKSLIGASVEKVNAGSLMV 413
           NILALNAAVEAARAG QGRGFAVVAAEVR+LA RSA AAK+IK LI  S  KV +G+ +V
Sbjct: 381 NILALNAAVEAARAGEQGRGFAVVAAEVRTLAQRSAAAAKDIKGLIDDSRAKVESGNQLV 440

Query: 414 DGAGRTMKEIVVEVNRVSHMIAEISTATREQSDGITQVATAVGHLDQVTQQNAALVEQST 473
               + M E+   V  ++  +AEI+ A+ EQS GI Q+  AV  +D+ TQQNAALVEQ+ 
Sbjct: 441 RETAQAMGELGGAVENMAVTMAEITVASNEQSGGIEQLNQAVNAIDETTQQNAALVEQAA 500

Query: 474 AASESLRTQMELLVKAVNVFK 494
           AA+E+LR Q   L +AV+VFK
Sbjct: 501 AAAENLRDQAVKLSQAVSVFK 521