Pairwise Alignments

Query, 359 a.a., ABC-type amino acid transport/signal transduction systems, periplasmic component/domain from Phaeobacter inhibens DSM 17395

Subject, 245 a.a., amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 52.8 bits (125), Expect = 1e-11
 Identities = 48/235 (20%), Positives = 91/235 (38%), Gaps = 21/235 (8%)

Query: 120 LTGDDYAPFTSKTAHNGGLITEVVNAAMTDAAPAQGF-AIHWVDDWASHFDPLLSNALLD 178
           L  D + PFT  T  NGGL T++V+ A+  A  A  F  + W            + AL+ 
Sbjct: 27  LVADAWPPFTDATLINGGLATDIVSTALARAGYASDFEQVPW------------ARALMG 74

Query: 179 LGFPWYRPDCDTMPESYRCVNFLFSDPMFETLMLLFVDKSRPFTFESDADIEGKTLCRPA 238
           +G   Y    +   +  R     FS       +     +  P  F++   +    +    
Sbjct: 75  VGDGRYDVLVNAWYDDARTQLGQFSGEYLLNRVRFIKRRDDPIEFQNLEQLHDYPIAVVR 134

Query: 239 GYLTFDLDGYGRRWMEEKKITLKQPHKVADCFEMVAKGEADAVAINEFTGRSVMKEND-- 296
           GY       Y   +  + ++     H  A    M+A         +E+  R  +      
Sbjct: 135 GY------AYSAAFDGDAQLQKVPVHNFAMAVRMLAAQRVRLTVEDEYVARYYLSRESTR 188

Query: 297 LLDQFEVLPLPLSVLGIHVVVHKTHPQADEMLAMINTGLRNIRENGRYQAIIEDH 351
           + +  E LP PLS   +H++V   +P+  +++A  +  +  ++ +G Y  +++ H
Sbjct: 189 VRNTVEFLPKPLSENSLHILVSLKNPEHAQIVASFDREIAKMKADGSYARLMKQH 243