Pairwise Alignments

Query, 373 a.a., DNA polymerase III, gamma/tau subunits from Phaeobacter inhibens DSM 17395

Subject, 341 a.a., DNA polymerase III, delta prime subunit from Agrobacterium fabrum C58

 Score =  179 bits (455), Expect = 8e-50
 Identities = 126/349 (36%), Positives = 176/349 (50%), Gaps = 28/349 (8%)

Query: 15  GAPHPRETLHLFGQAQAEQDFLTAFNSDRLHHGWLLTGPQGVGKATLAWRIAAFLLSQPP 74
           GA  P++   LFG  +AE     ++ S + HH  L+ GP+G+GKATLA+R A  +L+ P 
Sbjct: 10  GAIAPQQNTRLFGHEEAEAFLAQSYRSGKGHHAILIEGPEGIGKATLAFRFANHVLTHPD 69

Query: 75  AEDAGLFGAPPPATSLDIGMDHPVMHRIQALAEPGLASITRSVNDK-GKLRDQIVVDDIR 133
              A  F A P   SL       V  +I A A   L  +TR V++K G+++  I VD++R
Sbjct: 70  PASAPDFLADPDPQSL-------VSRQITAGASHNLLHLTRPVDEKTGRVKSAITVDEVR 122

Query: 134 ALNKFFGLSATDGGRRVVIVDAADEMNTSAANALLKMLEEPPARTTLLLVSHQPSRLLPT 193
               FF  ++  G  R+VI+D AD++N +AANA+LK+LEEPP R   L++SH P +LLPT
Sbjct: 123 RAGHFFSQTSGTGNWRIVIIDPADDLNRNAANAILKILEEPPKRAMFLVLSHAPGKLLPT 182

Query: 194 IRSRCRLLRFAPLSPEDMQAALTQAG-AELPRQAEHLAALANGSVGAALRLLNLGGLQAY 252
           IRSRC  LR  PLS   M  AL Q   +    + + L   + GSV  AL+L+N GG    
Sbjct: 183 IRSRCMPLRLLPLSDAAMVQALDQLDISPEGEKRDALLTASKGSVAQALKLMNYGGSDIV 242

Query: 253 SDVVRLLDSMPRLDRQRAMTLAEQAAARGGADKFELLLTLIDTALARLARTGATGMAPQP 312
                ++ +     R+R   LAE  A + G       +  +   L   AR  A  MA   
Sbjct: 243 EAFAEVMSAEGPGARKRMHKLAEVLAQKDGDIVLGFFMEHVTEELMERAR--AAAMAGDI 300

Query: 313 EAAPQEAAVLSRLSPTPQKARAWADLAAQVTARMRHGQAVNLDPAALVL 361
            AA + A + S LS                  R+   QA NLD   +VL
Sbjct: 301 AAAEKHARLSSTLS-----------------ERITVAQAYNLDKKQMVL 332