Pairwise Alignments

Query, 1151 a.a., putative chromosome segregation protein SMC from Phaeobacter inhibens DSM 17395

Subject, 1162 a.a., Chromosome partition protein Smc from Pseudomonas putida KT2440

 Score =  455 bits (1171), Expect = e-132
 Identities = 379/1200 (31%), Positives = 577/1200 (48%), Gaps = 90/1200 (7%)

Query: 1    MRFSKLRLNGFKSFVDPTDLLIADGLTGVVGPNGCGKSNLLEALRWVMGENRPKAMRGGG 60
            MR   +RL GFKSFVDPT +     +  VVGPNGCGKSN+++A+RWVMGE+  K +RG  
Sbjct: 1    MRLKCIRLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60

Query: 61   MEDVIFAGTSSRPARNFAEVSLQIDNSERLAPSGFNESDNLEILRRITRDVGSAYKTNGK 120
            M DVIF G+S R   + A + L  DNSE      +     + I R++TRD  ++Y  NG 
Sbjct: 61   MTDVIFNGSSGRKPVSQASIELVFDNSETTLVGEYAAYAEISIRRKVTRDGQNSYYLNGT 120

Query: 121  DVRARDVQMLFADASTGAHSPALVRQGQIAELINAKPKARRRILEEAAGISGLYQRRHEA 180
              R RD+  +F     G  S +++ QG I++LI AKP+  R  +EEAAGIS   +RR E 
Sbjct: 121  KCRRRDITDIFLGTGLGPRSYSIIEQGMISKLIEAKPEELRNFIEEAAGISKYKERRRET 180

Query: 181  ELKLKNTEQNLLRVDDVIEQLAAQLSQLARQARHAQRYRDIGEQLRRAEGMLLYRRWREA 240
            E +++ T++NL R+ D+ E+L  QL +L RQA+ A++YR+   Q R+ +  L   RWR+ 
Sbjct: 181  ENRIRRTQENLARLTDLREELERQLERLHRQAQAAEKYREYKAQERQLKARLSALRWRDL 240

Query: 241  DDARLEAEDILRTRETQAAKAEALARVADGKRLEAESALPPLREEEAIAAAVLQRLFVQR 300
            D+   + E ++     Q    EAL      ++  A++++  LR+     +    ++  + 
Sbjct: 241  DEQVRQRESVI---GDQGVSHEALV----AEQRNADASIERLRDGHHELSERFNQVQGRF 293

Query: 301  DALSDQEAQARQTIETLTNRVAQLGRD--------IERESGLNRD------AGETIERLD 346
             +++   A+  Q+I+    R+ QL  D        +E ES L  D       GE +  L+
Sbjct: 294  YSVAGDIARVEQSIQHGQQRLRQLQDDFKEAERTRLETESHLGHDRTLLATLGEELAMLE 353

Query: 347  WEQRELARAAIGHDDRMAEAAERSREAGSVLQAREEHLTSLTE-----------DVARLA 395
             EQ     AA        EAA    EA   +   +E   S                ARL 
Sbjct: 354  PEQEMTLAAA-------EEAAAALEEAELGMHGWQEQWDSFNSRSAEPRRQAEVQQARLQ 406

Query: 396  ARHQSAQRQVEDCRRGLLRAEEEGGASRD-AMVEAGDTLAQAEAAFEAAIEAEEEARAAA 454
                S +RQ E  R+ +   E+ G   +D AM+E  + LA +E   E     EE+     
Sbjct: 407  QLETSLERQAERQRKLVEEREQLGSDPQDAAMLELAEQLASSEMLLEELQLCEEQVIERL 466

Query: 455  ELADEALAAADEARNDTQSREAEARARRSEAEG-ELGALRAEVTALAKLVERDTAEGGHV 513
            E A E L  A +A+   Q        R +  E  +  AL     A   L  +   +   +
Sbjct: 467  ESAREQLQQATQAQQQAQGDLQRLGGRLASLEALQQAALEPGAGAAQWLHGQGLEQQPRL 526

Query: 514  LDEMRVAAGYEKALGAALADDLRAPLAEVDGPSGWVTLPPYDGDAPLPAGA---VPLSL- 569
             + +RV  G+E A+   L  DL+A L +      +  L   +    L  GA   +P SL 
Sbjct: 527  AEGLRVEPGWELAVETVLGADLQAVLVDDFNDLDFAGLEQGELRLLLAVGAGATLPGSLL 586

Query: 570  -HVSSPDALHRRISQVGLVDADAARDLHSR--LMPGQRLVTLEGDLWRWDGFRAWAEDAP 626
              V     L   + QV  V+ D A+ L  R  L  GQ LV+ +G    W G         
Sbjct: 587  EKVEGRIDLAPWLGQVRPVE-DLAQALEQRGSLGEGQSLVSRDG---YWVG--------- 633

Query: 627  SAAALRLEQMNRLE----VLKQDMEHVGARADGAKAAHEVLMRKLAEVTTADQTARQARR 682
                LR+ +    E       Q++E +G      +AA E L ++L  +        + R 
Sbjct: 634  -RHFLRVRRGGEAEGGVLARGQEIERLGQEQLEQEAALEQLDQQLQALREQQLDLEEQRE 692

Query: 683  VADQRVADAARALSRAESHRNLSEGKLETLSIAVARHDEDAA-----AAQAHLTEAEAAV 737
               +R  D  R     ++  + S  + E + +   R  E+ +      A  H    EA +
Sbjct: 693  QLRRRTQDENRLHGELKASLSASRARAEQVELRRRRLQEELSELEEQRALEHEQLGEARL 752

Query: 738  EGLEDLAEARAKVEDIKQAVEAARITMLTHRSTQDELRREGEARTARGQQVTKDLSGWRH 797
              L++  E  A+  + ++ + A R T+   R + D +R+E         Q+   L   R 
Sbjct: 753  L-LQEALELMAQDTEQREQLMARRDTL---RESLDRVRQEARQHKDHAHQLAVRLGSLRA 808

Query: 798  RLESADRRIAELTERRAATEEELQEAHQVPAEIAET-HEELNLAIEEAEARKAVASDALI 856
            + +S  R+  E  E++AA   E QE   +  E  E   EEL L +EE   R+    + + 
Sbjct: 809  QHDST-RQALERLEQQAARLTERQEQLSLNLEEGEAPQEELRLKLEELLERRMSVDEEMR 867

Query: 857  GAETVLRDAVQNERECARLASEAREARARSEARCDAAR-EAVGHAEARIREEQQTVPD-- 913
             A   + +A +  R+  +  ++A +       + +  R E  G    R   ++Q + D  
Sbjct: 868  LARLHMDEADRELRDAEKRRTQAEQQAQLLRGQLEQLRLECQGLDVRRKTLQEQLLADGY 927

Query: 914  ---ALLASLDATPEDMPNAEELEAEVNRHKRQRDALGAVNLRAEEDARTVQDEHDQLVRE 970
                +LA+L+A   +    +ELE    R +R    LGA+NL A E+     +    L  +
Sbjct: 928  DLQGVLATLEAEASEQGTEQELEQLEARIQR----LGAINLAAIEEYEQQSERKRYLDAQ 983

Query: 971  KADLEEAVKTLRSGIASLNREGRERLLTAFEEVNASFTMLFTHLFGGGEANLVMVESDDP 1030
             ADL EA++TL + I  +++E R R    F+++NA    LF  +FGGG A L +   +D 
Sbjct: 984  DADLVEALETLENVIRKIDKETRNRFKDTFDQINAGLQALFPKVFGGGSAYLELT-GEDL 1042

Query: 1031 LDAGLEIMCQPPGKKLSTLSLLSGGEQTLTAMALIFAVFLSNPAPICVLDEVDAPLDDAN 1090
            LD G+ IM +PPGKK ST+ LLSGGE+ LTA+AL+FA+F  NPAP C+LDEVDAPLDDAN
Sbjct: 1043 LDTGVTIMARPPGKKNSTIHLLSGGEKALTALALVFAIFKLNPAPFCMLDEVDAPLDDAN 1102

Query: 1091 VTRFCDLLDEMCRQTDTRFLIITHHAVTMARMDRLFGVTMQEKGVSQLVSVDLKKAEALV 1150
            V R+  L+ EM      +F+ ITH+ + M   D+L GVTM E G S+LV+VD++ A A+V
Sbjct: 1103 VGRYARLVKEM--SESVQFIYITHNKIAMEMADQLMGVTMHEPGCSRLVAVDVEAAMAMV 1160