Pairwise Alignments

Query, 285 a.a., 5-deoxy-D-glucuronate isomerase (EC 5.3.1.30) (from data) from Phaeobacter inhibens DSM 17395

Subject, 270 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  105 bits (261), Expect = 1e-27
 Identities = 64/228 (28%), Positives = 98/228 (42%), Gaps = 9/228 (3%)

Query: 26  FNIVKLTKGQTFEYQVPGYETCIVPATGTVDIEVEGLSYAGVGKRTVDVWDGEPEGVYIP 85
           F + +L  G+T        E  +V   G   I   G  +  +G R        P  VY+P
Sbjct: 30  FGLYRLKPGETATENTGDTEVILVLVEGKATISAGGKDFGELGDRMNVFERKPPHCVYVP 89

Query: 86  VGAKVTITCTTDATETFIAGAKYDKVLEPFDVRAGGIDKVQYGSDDTKTHRKIKHILGQK 145
            G++ ++T TTD T             E   +   G+   + G      + +    +  +
Sbjct: 90  AGSEWSLTATTDCTVGVCTAPGEKGSREAQQIGPNGVQLTERGKG---ANTRYIFPIAME 146

Query: 146 QHDKVGRLLVSELFTVGQGGWSGFPAHKHDTDRKDADGNIIETRHDETYNFRFRPNHGSG 205
           + D    LLV+E+FT   G WS +P H+HD D          T  +ETY  R  P  G G
Sbjct: 147 ERDVADSLLVTEVFTPS-GNWSSYPPHRHDEDNYPD-----MTYLEETYYHRLNPAQGFG 200

Query: 206 VQILQREEGKPGDAYQLMDGSTIMIDKGYHPCAVMPGYEMYYFTILGG 253
            Q +  E+G   +   + DG  +++ KG+HPC    GYEMYY  ++ G
Sbjct: 201 FQRVFTEDGSLDETMAVSDGDVVLVPKGHHPCGAPYGYEMYYLNVMAG 248