Pairwise Alignments

Query, 805 a.a., DNA gyrase subunit GyrB from Phaeobacter inhibens DSM 17395

Subject, 805 a.a., DNA gyrase subunit B from Pseudomonas simiae WCS417

 Score =  840 bits (2170), Expect = 0.0
 Identities = 445/804 (55%), Positives = 569/804 (70%), Gaps = 14/804 (1%)

Query: 11  YGADSIKVLKGLEAVRKRPGMYIGDTDDGSGLHHMVYEVVDNGIDEALAGHADRVVVKIH 70
           Y + SIKVLKGL+AVRKRPGMYIGDTDDGSGLHHMV+EVVDN IDEALAGH D + + IH
Sbjct: 7   YDSTSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGHCDDISIIIH 66

Query: 71  ADSSVSVNDNGRGIPVGIHEEEGVSAAEVIMTQLHAGGKFDSNSYKVSGGLHGVGVSVVN 130
            D S++V DNGRGIPV +H+EEGVSAAEVIMT LHAGGKFD NSYKVSGGLHGVGVSVVN
Sbjct: 67  PDESITVRDNGRGIPVDVHKEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSVVN 126

Query: 131 ALSDWLELRIWRDGKEHVARFERGDTAEHLKVVGDCGDQTGTEVRFLASTDTFSNLEYLF 190
           ALS+ L L + R GK     +  G   E +K+VGD  + TGT++ F  S +TF N+ + +
Sbjct: 127 ALSEELILTVRRSGKIWEQTYVHGVPKEPMKIVGD-SETTGTQIHFKPSAETFKNIHFSW 185

Query: 191 ETLEKRLRELAFLNSGVRIILIDERPAERLEVELF-YEGGVKEFVKYLDRSKSPVMEAPI 249
           + L KR+REL+FLNSGV I+L DER  +    ELF YEGG++ FV+YL+ +K+ V +   
Sbjct: 186 DILAKRIRELSFLNSGVGIVLKDERSGKE---ELFKYEGGLRAFVEYLNTNKTAVNQVFH 242

Query: 250 YITGDRDEIGVEVAMWWNDSYHETVLPFTNNIPQRDGGTHVAGFRGALTRTINNYAQSSG 309
           +     D IGVE+A+ WNDS++E +L FTNNIPQRDGGTH+ GFR ALTR +N Y ++ G
Sbjct: 243 FNIQREDGIGVEIALQWNDSFNENLLCFTNNIPQRDGGTHLVGFRSALTRNLNTYIEAEG 302

Query: 310 IAKKEKVSFTGDDAREGLTCVLSVKVPDPKFSSQTKDKLVSSEVRPVVESLVNEKLAEWF 369
           +AKK KV+ TGDDAREGLT ++SVKVPDPKFSSQTKDKLVSSEV+  VE  + +  +++ 
Sbjct: 303 LAKKHKVATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFSDFL 362

Query: 370 EENPNQAKQIVGKIIEAALAREAARKARELTRRKTAMDVNYLAGKLKDCSEKDPSKTEVF 429
            ENPN+AK +VGK+I+AA AREAARKARE+TRRK A+D+  L GKL DC EKDP+ +E++
Sbjct: 363 LENPNEAKLVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSELY 422

Query: 430 LVEGDSAGGSAQTGRDRMTQAILPLRGKILNVERARFDRMLGSQEIGNLVMALGTGIGRD 489
           LVEGDSAGGSA+ GR+R TQAILPL+GKILNVE+ARFD+M+ SQE+G L+ ALG GIGRD
Sbjct: 423 LVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCGIGRD 482

Query: 490 EFNIDKLRYHKIVIMTDADVDGAHIRTLLLTFFYRQMPELIEGGYLYIAQPPLYKVSRGK 549
           E+NIDKLRYH I+IMTDADVDG+HIRTLLLTFF+RQ+PELIE GY+YIAQPPLYKV +GK
Sbjct: 483 EYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQLPELIERGYIYIAQPPLYKVKKGK 542

Query: 550 SEVYLKDQAALDEYLINQGVDGAVLKLG-SGEELVGQDLARVVDEARQLKRVLDAFPTHY 608
            E Y+KD  A++EY+    ++ A L L      + G+ L R+V++ R + + L      Y
Sbjct: 543 QEQYIKDDDAMEEYMTQSALEDASLHLNDEAPGISGESLERLVNDFRMVMKTLKRLSRLY 602

Query: 609 PRHILEQAAVAGAFVPGAVDADLQGVADKVAQ------RLDLIALEYERGWRGRITQDHG 662
           P+ + E      A V      D   + D +AQ       ++   L Y+   R    ++  
Sbjct: 603 PQELTEHFIYLPA-VSLEQLGDHAAMQDWLAQYEVRLRTVEKSGLVYKASLREDRERNVW 661

Query: 663 I-RLSRILRGVEELRTLDGPMLRSGEARKTGSFTNSLQETYGATATLVRRDRSQAIHGPL 721
           +  +  I  G+    T +     S + +   +    L       A + R +R + +    
Sbjct: 662 LPEVELISHGLSNYVTFNRDFFGSNDYKTVVTLGAQLSTLLDDGAYIQRGERKKQVKEFK 721

Query: 722 GLLKAILEEGEKGLALQRYKGLGEMNPDQLWETTLDPDARTLLQVRVEDMVEADDLFTKL 781
             L  ++ E  K   +QRYKGLGEMNPDQLWETT+DP  R +L+V +ED + AD +F  L
Sbjct: 722 EALDWLMAESTKRHTIQRYKGLGEMNPDQLWETTMDPAQRRMLRVTIEDAIGADQIFNTL 781

Query: 782 MGDVVEPRREFIQKNALSVENLDF 805
           MGD VEPRR+FI+ NAL+V NLDF
Sbjct: 782 MGDAVEPRRDFIESNALAVSNLDF 805