Pairwise Alignments

Query, 805 a.a., DNA gyrase subunit GyrB from Phaeobacter inhibens DSM 17395

Subject, 806 a.a., DNA gyrase subunit B from Pseudomonas putida KT2440

 Score =  846 bits (2185), Expect = 0.0
 Identities = 452/815 (55%), Positives = 569/815 (69%), Gaps = 35/815 (4%)

Query: 11  YGADSIKVLKGLEAVRKRPGMYIGDTDDGSGLHHMVYEVVDNGIDEALAGHADRVVVKIH 70
           Y + SIKVLKGL+AVRKRPGMYIGDTDDGSGLHHMV+EVVDN IDEALAGH D + V IH
Sbjct: 7   YDSSSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGHCDDITVIIH 66

Query: 71  ADSSVSVNDNGRGIPVGIHEEEGVSAAEVIMTQLHAGGKFDSNSYKVSGGLHGVGVSVVN 130
            D S+SV DNGRGIPV +H+EEGVSAAEVIMT LHAGGKFD NSYKVSGGLHGVGVSVVN
Sbjct: 67  PDESISVRDNGRGIPVDVHKEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSVVN 126

Query: 131 ALSDWLELRIWRDGKEHVARFERGDTAEHLKVVGDCGDQTGTEVRFLASTDTFSNLEYLF 190
           ALS+ L L + R GK     +  G     + VVGD  + TGT + F  S +TF N+ + +
Sbjct: 127 ALSEKLVLTVRRSGKIWEQTYVHGVPQAPMAVVGD-SETTGTHIHFKPSAETFKNIHFSW 185

Query: 191 ETLEKRLRELAFLNSGVRIILIDERPAERLEVELF-YEGGVKEFVKYLDRSKSPVMEAPI 249
           + L KR+REL+FLNSGV I+L DER  +    E F YEGG++ FV+YL+ +K+PV     
Sbjct: 186 DILAKRIRELSFLNSGVGILLKDERSGKE---EFFKYEGGLRAFVEYLNTNKTPVNSQVF 242

Query: 250 YITGDRDE-IGVEVAMWWNDSYHETVLPFTNNIPQRDGGTHVAGFRGALTRTINNYAQSS 308
           +    RD+ +GVEVA+ WNDS++E +L FTNNIPQRDGGTH+ GFR +LTR++N+Y +  
Sbjct: 243 HFNVQRDDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLVGFRSSLTRSLNSYIEQE 302

Query: 309 GIAKKEKVSFTGDDAREGLTCVLSVKVPDPKFSSQTKDKLVSSEVRPVVESLVNEKLAEW 368
           G+AKK KV+ TGDDAREGLT ++SVKVPDPKFSSQTKDKLVSSEV+  VE  +N+  A++
Sbjct: 303 GLAKKNKVATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMNKYFADF 362

Query: 369 FEENPNQAKQIVGKIIEAALAREAARKARELTRRKTAMDVNYLAGKLKDCSEKDPSKTEV 428
             ENPN+AK +VGK+I+AA AREAARKARE+TRRK A+D+  L GKL DC EKDP+ +E+
Sbjct: 363 LLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSEL 422

Query: 429 FLVEGDSAGGSAQTGRDRMTQAILPLRGKILNVERARFDRMLGSQEIGNLVMALGTGIGR 488
           +LVEGDSAGGSA+ GR+R TQAILPL+GKILNVE+ARFD+M+ SQE+G L+ ALG GIGR
Sbjct: 423 YLVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCGIGR 482

Query: 489 DEFNIDKLRYHKIVIMTDADVDGAHIRTLLLTFFYRQMPELIEGGYLYIAQPPLYKVSRG 548
           +E+NIDKLRYH I+IMTDADVDG+HIRTLLLTFF+RQ+PEL+E GY+YIAQPPLYKV RG
Sbjct: 483 EEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQLPELVERGYIYIAQPPLYKVKRG 542

Query: 549 KSEVYLKDQAALDEYLINQGVDGAVLKLG-SGEELVGQDLARVVDEARQLKRVLDAFPTH 607
           K E Y+KD  A++EY+    ++ A L L  S   + G  L  +V+E R + + L      
Sbjct: 543 KQEQYIKDDEAMEEYMTQSALEDASLHLDESAPAVSGVQLEALVNEFRSVMKTLKRLSRL 602

Query: 608 YPRHILEQAAVAGAFVPGAVDADLQGVADKVAQRLDLIALEYERGWRGRITQDHGIRLSR 667
           YP  + E       ++P   +  L+ + D    +  L   +     R   +Q  G+  + 
Sbjct: 603 YPEELTEHF----VYLP---EVTLEQLGDHAVMQAWLAQFQA----RLNSSQKSGLAYNA 651

Query: 668 ILR-----------------GVEELRTLDGPMLRSGEARKTGSFTNSLQETYGATATLVR 710
            LR                 G+    T +     S + R   +    L    G  A + R
Sbjct: 652 SLREDKERNVWLPEVEITSHGLASYITFNRDFFGSNDYRTVVNIGAKLSSLLGEGAYVQR 711

Query: 711 RDRSQAIHGPLGLLKAILEEGEKGLALQRYKGLGEMNPDQLWETTLDPDARTLLQVRVED 770
            +R +AI      L  ++ E  K   +QRYKGLGEMNPDQLWETT+DP  R +L+V +ED
Sbjct: 712 GERRKAIVEFKEGLDWLMNETTKRHTIQRYKGLGEMNPDQLWETTMDPTVRRMLKVTIED 771

Query: 771 MVEADDLFTKLMGDVVEPRREFIQKNALSVENLDF 805
            + AD +F  LMGD VEPRR+FI+ NALSV NLDF
Sbjct: 772 AIAADQIFNTLMGDAVEPRRDFIESNALSVSNLDF 806