Pairwise Alignments

Query, 387 a.a., carbamoyl-phosphate synthase small chain from Phaeobacter inhibens DSM 17395

Subject, 378 a.a., carbamoyl phosphate synthase small subunit from Pseudomonas simiae WCS417

 Score =  387 bits (995), Expect = e-112
 Identities = 208/379 (54%), Positives = 254/379 (67%), Gaps = 9/379 (2%)

Query: 11  ACLALADGTIFYGNGFGAYGETVAELCFNTAMTGYQEIMTDPSYAGQIVTFTFPHIGNTG 70
           A LALADG+IF G   GA G+TV E+ FNTAMTGYQEI+TDPSYA QIVT T+PHIGNTG
Sbjct: 5   AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64

Query: 71  VTPEDDETADPVAAGMVVKWDPTLASNWRATEELKDWLTRTNRIAIGGIDTRRLTRAIRQ 130
            TPED E+    +AG+V++  P +ASNWR T  L D+L   N +AI GIDTRRLTR +R+
Sbjct: 65  TTPEDVESDRVWSAGLVIRDLPLVASNWRNTMSLSDYLKANNVVAIAGIDTRRLTRILRE 124

Query: 131 LGAPHVALAHDPDGNFDIEALVAKAREWSGLEGLDLAKDVTCSQSYRWDEMRWAWPEG-- 188
            G+ +  +      N   EA +A A+ + GL+G+DLAK V+  + Y W    W       
Sbjct: 125 KGSQNGCIM--VGDNISEEAAIAAAQGFPGLKGMDLAKVVSVKEKYEWRSTVWDLKTDSH 182

Query: 189 --YTRQEAPKHKVVAIDYGAKRNILRCLASAGCDVTVLPASATAEEVLAHSPDGVFLSNG 246
                 + P H VVA DYG K NILR L   GC VTV+PA   A +VLA  PDGVFLSNG
Sbjct: 183 ATIDAADLPYH-VVAYDYGVKYNILRMLVERGCRVTVVPAQTPASDVLALQPDGVFLSNG 241

Query: 247 PGDPAATGEYAVPMIQQILDTTDLPMFGICLGHQMLALALGGKTVKMNHGHHGANHPVKE 306
           PGDP    +YA+  I+ +L+ T++P+FGICLGHQ+LALA G KT+KM HGHHGANHPV++
Sbjct: 242 PGDPEPC-DYAIQAIKDVLE-TEIPVFGICLGHQLLALASGAKTLKMGHGHHGANHPVQD 299

Query: 307 NATGKVEITSMNHGFAVDGQSLPDGVEETHVSLFDGSNCGIRISDRPVYSVQHHPEASPG 366
             TG V ITS NHGFAVD  +LP  V   H SLFDGS  GI  +D+  +S Q HPEASPG
Sbjct: 300 LDTGVVMITSQNHGFAVDEATLPSNVRAIHKSLFDGSLQGIERTDKSAFSFQGHPEASPG 359

Query: 367 PQDSFYLFERFAEAMAARK 385
           P D   LF+RF   MA R+
Sbjct: 360 PNDVAPLFDRFINEMAKRR 378