Pairwise Alignments

Query, 326 a.a., type II secretion system protein F-like protein from Phaeobacter inhibens DSM 17395

Subject, 328 a.a., components of type IV pilus from Agrobacterium fabrum C58

 Score =  144 bits (362), Expect = 4e-39
 Identities = 93/326 (28%), Positives = 171/326 (52%), Gaps = 17/326 (5%)

Query: 9   DLLVTHLGPFGPLLVVGLIGLFMILLAIPLLLNQPEDPLKKLQKSMSASTQTKPKKERLR 68
           DL      P   + ++  + +F  L  + +   + +D L K  K++S+  +    +ER R
Sbjct: 4   DLFSRLTDPQTIIAILVTLAVFATLYTLIMPFLERKD-LAKRMKAVSSERELIRSRERER 62

Query: 69  QA------------DRNEQLQKFASFLEPQDAAELSKMELKLRQAGYQSKDSVRFFHFAQ 116
            A            + N+  ++       ++A        KLR AG++S++++  F  A+
Sbjct: 63  LATVTRDGRTSLRGNNNKSARRIVEKFNLREALADQNTMNKLRAAGFRSQNALNTFLAAR 122

Query: 117 FALGLIGLALGLFYVYVLN--ADMEYDSQQMVIRIIGPGAAAYMLPKYWITRRIEERKQE 174
           F L  I LA+   +V+VL   AD  +  + M + + G     +  P  +++ R+ +R+  
Sbjct: 123 FVLPFIFLAVAFTWVFVLGNLADKAFVVRLMAVLVFG--YIGFYAPNIYVSNRMTKRQAS 180

Query: 175 ITSGFPDALDMMLVCVEAGQSLDQAIVRVAKELHASYPALADEFDIVAQEMKAGKDKDKV 234
           I   +PDALD+ML+C+E+G S++ A+ RVA+E+    P LA+E  +   E+   +D+   
Sbjct: 181 IKRAWPDALDLMLICIESGVSMESAMRRVAEEMGEQSPELAEEMILTTAELSFLQDRRTA 240

Query: 235 MRDMGTRCGVQDVSSFVTVMIQSATFGTSIAEALRVYAGEMRDKRVMRAEEAANKLPTKM 294
           + + G R  +  V S V  +IQ+  +GT +A+ALRV A E RD+R+  AE+ A  LP K+
Sbjct: 241 LENFGMRTQLDGVKSVVQALIQAERYGTPLAQALRVLAQEGRDERMNEAEKKAAALPPKL 300

Query: 295 TLATMTLTVPPLLIILVGPSAQGIAN 320
           T+  +   +P L+ +++GP+   +A+
Sbjct: 301 TVPMIIFFLPVLIAVILGPAGIRVAD 326