Pairwise Alignments

Query, 1221 a.a., Uncharacterized protein conserved in bacteria from Phaeobacter inhibens DSM 17395

Subject, 1259 a.a., autotransporter assembly complex protein TamB from Escherichia coli ECRC102

 Score = 65.9 bits (159), Expect = 2e-14
 Identities = 178/826 (21%), Positives = 309/826 (37%), Gaps = 153/826 (18%)

Query: 417  ELEMTGTLDQSQGLSLDGQIAA------ALTGL-VPTDPALAEALGAALTFDGRV--TTD 467
            EL++TG + Q++ +++DG +         + GL +   P  AE  G     D  +  T +
Sbjct: 487  ELKLTGNVKQNK-VNVDGTLKGNSYMQWMIPGLHLELGPNSAEVKGELGVKDLNLDATIN 545

Query: 468  GPGALRITDMLLLGTDYGATGAVTIDGLESGLRIAADIEANAQNLARFSGLAGQSLNGRM 527
             PG     D  L G    A G V + G     ++ ADI A         GL  Q      
Sbjct: 546  APGL----DNALPGLGGTAKGLVKVRGTVEAPQLLADITAR--------GLRWQ------ 587

Query: 528  TATAAGSATPLSGAFDIELSVLGQDLSAGLKPVDDLIGDTTTIALKAARDEAGLRIDRFE 587
                             EL+V    +   +K  D + G       + ++ +  + +    
Sbjct: 588  -----------------ELTVAQVRVEGDIKSTDQIAGKLDVRVEQISQPDVNINL--VT 628

Query: 588  LDAKALTAQANGQLG----STSGQLSLSATLKQLEKI---------LPQAPGPLEFSADI 634
            L+AK    Q   QL       SGQL+L+ +  + E+               GP   + DI
Sbjct: 629  LNAKGSEKQHELQLRIQGEPVSGQLNLAGSFDRKEERWKGTLSNTRFQTLVGPWSLTRDI 688

Query: 635  T-----RENQIFSG-------SAELRGPKSSRAELTGQMTTNGDGDLQFDAAINALERFV 682
                  +E +I  G       +AEL  P++  A   G+   N +   +FD A+  L+ F+
Sbjct: 689  ALDYRNKEQKISIGPHCWLNPNAELCVPQTIDAGAEGRAVVNLN---RFDLAM--LKPFM 743

Query: 683  PTLAGSLSAKGTASRRAGV-W--TFDGAAEGPAGLSA-DLDGTVSENKGDADITFDALVA 738
            P    +  A G  + +A V W  T +G  +G   LS  ++  T + N     + F  L  
Sbjct: 744  PE---TTQASGIFTGKADVAWDTTEEGLPQGSITLSGRNVQVTQTVNDAALPVAFQTL-- 798

Query: 739  EVQRFVPGLPGRLTAEGTARRRDGIWQI----NSRAIGPAGVTSTVAGSWDEVQGRADID 794
                        LTAE    R +  W I    N +  G   VT        + QGR ++ 
Sbjct: 799  -----------NLTAELRNNRAELGWTIRLTNNGQFDGQVQVT--------DPQGRRNLG 839

Query: 795  AKGQLR---LEGLNP-FISPNLIRGPAQFDLSLKGEPSLANLSGQIRTSGTSLAIPAAAQ 850
                +R   L  +NP F       G    +L L G+     L GQ++ +G  +       
Sbjct: 840  GNVNIRNFNLAMINPIFTRGEKAAGMVSANLRLGGDVQSPQLFGQLQVTGVDIDGNFMPF 899

Query: 851  RIDAINATVSIARSRANIQLTAAPRDGGQLRVTGPVGLTAPFDAQLQIAL----ANIGLS 906
             +      V+    R+ +  T   + G ++ + G    +   + + ++        I + 
Sbjct: 900  DMQPSQLAVNFNGMRSTLAGTVRTQQG-EIYLNGDADWSQIENWRARVTAKGSKVRITVP 958

Query: 907  DQLSYETELSGALTLSGGLIGTNRLSGRIDVGETNINL-----ATAGGSVTAAPIPDIRH 961
              +  +         +  L     L GR+DV    I +     +  G S     + D   
Sbjct: 959  PMVRMDVSPDVVFEATPNLF---TLDGRVDVPWARIVVHDLPESAVGVSSDVVMLNDNLQ 1015

Query: 962  QDEPAEVRRTRARAGLIDSGNGGGDGSGRTLLDVLISAPNRINARGRGVRAELGGQIQLR 1021
             +EP         A +  + N            +++   N +     G++A L G + + 
Sbjct: 1016 PEEPKT-------ASIPINSN------------LIVHVGNNVRIDAFGLKARLTGDLNVV 1056

Query: 1022 GSTANLAPAGQISLIRGTFDILGRRLALDEGRITLQGDL-RPYL---LLRSSAATSEGT- 1076
                 L   GQI++  G F   G+ L + +G +   G   +PYL    +R+  AT +   
Sbjct: 1057 QDKQGLGLNGQINIPEGRFHAYGQDLIVRKGELLFSGPPDQPYLNIEAIRNPDATEDDVI 1116

Query: 1077 ATLELSGLIDSPSIKVTADPERPSEEALALLLFGDNIQDLSPLALARLAGSVATLSGRGG 1136
            A + ++GL D P  ++ +DP    + AL+ LL G  ++  S  + +    S+    G   
Sbjct: 1117 AGVRVTGLADEPKAEIFSDPAMSQQAALSYLLRGQGLE--SDQSDSAAMTSMLIGLGVAQ 1174

Query: 1137 SNRAEGKLRDETGASNVELGLDNLG-AGLLDIGGYVSENVYTDFNV 1181
            S +  GK+ +  G SN+ L    +G +  + + GYV   +   + V
Sbjct: 1175 SGQIVGKIGETFGVSNLALDTQGVGDSSQVVVSGYVLPGLQVKYGV 1220



 Score = 35.4 bits (80), Expect = 3e-05
 Identities = 74/342 (21%), Positives = 127/342 (37%), Gaps = 64/342 (18%)

Query: 727  GDADITFDALVAEVQRF----------VPGLPGRLTAEGTARRRDGIWQI--------NS 768
            GD DIT   ++ +V             +    G L A GTA+  D  W +        N 
Sbjct: 247  GDTDITVRTMLLKVSSIDGNTKLDALDIDSNQGILNASGTAQLSDN-WPVDITLNSTLNV 305

Query: 769  RAIGPAGVTSTVAGSWDE-------VQGRADIDAKGQLRLEG----LNPFISPNLI---- 813
              +    V   V G+  E       + G  D+D + Q RL      LN  ++   I    
Sbjct: 306  EPLKGEKVKLKVGGALREQLEIGVNLSGPVDMDLRAQTRLAEAGLPLNVEVNSKQIYWPF 365

Query: 814  RGPAQF---DLSLKGEPSLANLSGQIRTSGTSLAIPAAAQRIDAINATVSIARSRANIQL 870
             G  Q+   DL LK    + + +  +RT+   L IP A   +DA      +   +    L
Sbjct: 366  TGEKQYQADDLKLKLTGKMTDYTLSMRTAVKGLEIPPATITLDAKGNEQQVNLDK----L 421

Query: 871  TAAPRDGGQLRVTGPVGLTAPFDAQLQIALANIGLSDQL-SYETELSGALTLSGGLIGTN 929
            T A  + G+  +   +        + ++ L  I  + ++  + ++L+G +   G L G  
Sbjct: 422  TVAALE-GKTELKALLDWQQAISWRGELTLNGINTAKEIPEWPSKLNGLIKTRGSLYGGT 480

Query: 930  --------RLSGRIDVGETNINLATAGGSVTAAPIPDIRHQDEPAEVRRTRARAGLIDSG 981
                    +L+G +   + N++    G S     IP + H +        +   G+ D  
Sbjct: 481  WQMEVPELKLTGNVKQNKVNVDGTLKGNSYMQWMIPGL-HLELGPNSAEVKGELGVKDLN 539

Query: 982  NGGGDGSGRTLLDVLISAPNRINARGRGVRAELGGQIQLRGS 1023
                       LD  I+AP   NA   G+     G +++RG+
Sbjct: 540  -----------LDATINAPGLDNAL-PGLGGTAKGLVKVRGT 569