Pairwise Alignments

Query, 577 a.a., ABC transporter, extracellular solute-binding protein from Phaeobacter inhibens DSM 17395

Subject, 579 a.a., putative Sugar ABC transporter, periplasmic sugar-binding protein from Pseudomonas putida KT2440

 Score =  751 bits (1938), Expect = 0.0
 Identities = 362/576 (62%), Positives = 441/576 (76%), Gaps = 13/576 (2%)

Query: 2   RKYLLSAAAVIAVVAGQAAYAD--EAAAKKWIDEEFQPSVLTKDEQLSEMQWFIKASEPF 59
           R   L+A  V+A V G  A+AD  E AAKKWI  EF+PS LT ++QL+E+QWFIKA+EPF
Sbjct: 9   RHLTLAALLVLASVQG-TAWADQYEEAAKKWIGSEFKPSTLTPEQQLAELQWFIKAAEPF 67

Query: 60  SGMEINVLSEGIPTHSYESEVLTKAFEEITGIKVNHQILGEGEVVQAVQTQMQTKRNLYD 119
            GM+INV+SE I TH YES+VL KAF EITGI++ H +L EG+VV+ +QTQMQ+ +N+YD
Sbjct: 68  RGMKINVVSETITTHEYESKVLAKAFSEITGIQLTHDLLQEGDVVEKLQTQMQSDKNIYD 127

Query: 120 AYVNDSDLIGTHSRLQLAYNLTDMMEGDFFDVTNPELDLGDFMGTQFTTGPDGDLYQLPD 179
            +VNDSDLIGTH R     ++TD+M  +    T+P LDL DF+G  FTT PDG +YQLPD
Sbjct: 128 GWVNDSDLIGTHFRYGKVESITDLMANEGKAYTSPTLDLKDFIGISFTTAPDGKVYQLPD 187

Query: 180 QQFANLYWFRKDWFDREDLQAAFKEKYGYDLGVPVNWSAYEDIAEFFSNDVKEIDGTTIF 239
           QQFANLYWFR DWF+R +L+A FKEKYGY+LGVPVNWSAYEDIA+FF+ DVKEIDG  ++
Sbjct: 188 QQFANLYWFRADWFERPELKARFKEKYGYELGVPVNWSAYEDIAKFFTEDVKEIDGKRVY 247

Query: 240 GHMDYGKRAPDLGWRMTDAWLSMAGAGSKGEPNGVPIDEWGIRMEADSCNPAGASVTRGG 299
           GHMDYGK+ P LGWR TDAW SMAG G KG PNG+P+DEWGIR+E   C+P G+SVTRGG
Sbjct: 248 GHMDYGKKDPSLGWRFTDAWFSMAGGGDKGLPNGLPVDEWGIRVE--DCHPVGSSVTRGG 305

Query: 300 AANGPAAVYAIRKWDEWLRKFAPPGAASYDFYQSLPALAQGNVAQQIFWYTAFTADMVKP 359
             NGPAAVYA +K+ +W+R +AP  A    F ++ P  AQGN+AQQIFWYTAFTADM KP
Sbjct: 306 DTNGPAAVYATQKYVDWMRAYAPKEAQGMTFSEAGPVPAQGNIAQQIFWYTAFTADMTKP 365

Query: 360 QSEGNNTVDGEGNPLWRMAPSPHGPYWEEGQKVGYQDVGSWTFLKSTPMDRAKAAWLYAQ 419
              G   V+ +G P WRMAPSP GPYWEEG K+GYQD GSWTF KSTP  +  AAWLYAQ
Sbjct: 366 ---GLPVVNADGTPKWRMAPSPKGPYWEEGMKLGYQDTGSWTFFKSTPEKQRLAAWLYAQ 422

Query: 420 FVVSKTVDVKKSHVGLTFIRDSSVNHESFTERAPKLGGLVEFYRSPDRVAWSPTGVNVPD 479
           FV SKTV +KK+ VGLT IR+S +N ++ TE APKLGGLVEFYRSP RV W+PTG NVPD
Sbjct: 423 FVTSKTVSLKKTIVGLTPIRESDINSQAMTELAPKLGGLVEFYRSPARVQWTPTGTNVPD 482

Query: 480 YPKLAQIWWQQIGDVNSGAFTPQEAMDRLAEEMDITMARMQRADEQASVYGGCGPRLNEE 539
           YP+LAQ+WW  I +V SG  TPQEA+D LA + D  M R+QR++ QA+    C P+LN E
Sbjct: 483 YPRLAQLWWSHIAEVASGEKTPQEALDGLARDQDRMMERLQRSNAQAT----CAPKLNPE 538

Query: 540 KDAEWWYANGGA-KPKLENEKPQGQTVNYDELVARW 574
           KDA++W+   GA K KL NEKP G+TV+Y+EL+  W
Sbjct: 539 KDAQYWFDQPGAPKAKLANEKPMGETVSYNELLKSW 574