Pairwise Alignments

Query, 985 a.a., putative ABC transporter cyclic nucleotide-binding protein from Phaeobacter inhibens DSM 17395

Subject, 599 a.a., lipid A export ATP-binding/permease protein MsbA from Phaeobacter inhibens DSM 17395

 Score = 68.9 bits (167), Expect = 9e-16
 Identities = 79/362 (21%), Positives = 164/362 (45%), Gaps = 24/362 (6%)

Query: 77  LAERMLRRFRYRLISRVLRFPQPYFERVSQGELVSMITSESEPMGGLMGDAVSQPVLQAG 136
           L ER++   R  +  RV+     +FE++  GE++S IT+++  +  ++G +VS  +    
Sbjct: 101 LGERVVADIRKAVFDRVIGMSPAFFEQIMTGEVLSRITTDTTLIQSVLGSSVS--IALRN 158

Query: 137 QMLTILYFLFMQNVWFGLAAVALIPLQGWLIPMLQ--RQINLLNKKRIRQIRALASEIGE 194
            ++ I   + M      L ++ L+ +   ++P+L   R++  ++++    I A +   GE
Sbjct: 159 MLIFIGGLVLMLLTSAKLTSLVLLIVPAVIVPILVLGRRLRKISRENQDWIAASSGNAGE 218

Query: 195 SAAGASTLRLNGGWRYRMAVITDRLGWLYDIRFEIYQKKFFMKFLNNFITQLTPFLFYA- 253
           +     T++    + + +A  ++    L +  F++  ++   +    F+T +  FL ++ 
Sbjct: 219 ALGAVQTVQ---AYTHEVASRSE-FSRLTETAFDVSMRRIQTRA---FLTVIVIFLVFSG 271

Query: 254 ------VGGYLVLEGKVSLGALVAALAAYKDLASPWKELLAYYNQTQDMALRWDVILERF 307
                 +G   V  G +S G LV  +     +A     L   +++ Q  A   + ++E  
Sbjct: 272 VVGVLWMGANDVRAGIMSEGTLVQFVIYAVLVAGSVAALSEIWSELQRAAGATERLVELL 331

Query: 308 DPPGMVDEVLMTGAPDDLQR-LRGDIVVEGVNVR-DANGNL-VLEDLNARFPAGKVIGVA 364
                VD+V    AP  L   +RG+I  + V+ R  A   +  L D++     G+ +   
Sbjct: 332 TA---VDQVQDPYAPRALAAPVRGEIRFDDVSFRYPARPQIPALVDVSLTVQPGETVAFV 388

Query: 365 APSEEDRRALAGLLTRELLPSAGEVLIDGQNMRDIHQAVIAARIGHATSRPVLFQGSFGD 424
            PS   +  +  ++ R   P++G V +DG+ +RD+ +      I      PV+F  S  D
Sbjct: 389 GPSGAGKTTIIQMIQRFYDPTSGAVCLDGRPLRDLQRDDFRQHIALVPQDPVIFALSARD 448

Query: 425 NV 426
           N+
Sbjct: 449 NI 450



 Score = 32.0 bits (71), Expect = 1e-04
 Identities = 21/108 (19%), Positives = 48/108 (44%)

Query: 744 FDLPIALGGQGLAASFAEPLAFSRASIKRPDILILDAAMASYDLDTRIAIHKNLRQLLPD 803
           +D  +   G  L+    + +A +RA ++   +L+LD A ++ D ++   +   + +L   
Sbjct: 482 YDSQVGERGVMLSGGQKQRIAIARAILRDAPVLLLDEATSALDAESERLVQAAVDELSQG 541

Query: 804 TTLIYLGSSFESPDVFDGYYELRQGRLVSDSPVADAVSDGAGSADLAR 851
            T + +     +    D    + +GR+++       V++    A LAR
Sbjct: 542 RTTLIVAHRLATVKKADRIVVMEEGRIIATGTHDQLVAEDGLYARLAR 589