Pairwise Alignments

Query, 185 a.a., 'RNA polymerase sigma-70, ECF subfamily; ECF26 subgroup' from Phaeobacter inhibens DSM 17395

Subject, 182 a.a., RNA polymerase sigma factor from Paraburkholderia sabiae LMG 24235

 Score = 87.8 bits (216), Expect = 1e-22
 Identities = 54/161 (33%), Positives = 83/161 (51%), Gaps = 2/161 (1%)

Query: 13  MSPDQFKSEMIGLLPRLRRFALSLTRSGADADDLLQEACALALQKWQQYDPAQPLDRWMF 72
           M+     S +  +LPRL  FAL ++    DA+DL+Q AC   L++  Q         WMF
Sbjct: 1   MTGADLSSMLPDMLPRLWAFALRISGDQHDAEDLVQRACVRGLERAHQLQADTAPLSWMF 60

Query: 73  RVLRNLWVSEIRKRRVRQGAGVVPVEEATELAASGVSGADVAETTLTARQVQSRIADMDP 132
            ++ + W++E+R R VR  + +   ++  E      S     + T+ A Q+   +  +  
Sbjct: 61  SIVHSTWINELRARSVRSRSSMEWDDDFLE-TVEDPSARTPEQITMNA-QIIEAVQRLPE 118

Query: 133 ALAQPLLLVCAEGYSYREVSELLDVPIGTVMSRIHRARKLL 173
           A    +LLV  EG SY E +E L VPIGTVMSR+ R R+ +
Sbjct: 119 AQRVVMLLVAVEGLSYSETAEALSVPIGTVMSRLSRGRQAI 159