Pairwise Alignments

Query, 185 a.a., 'RNA polymerase sigma-70, ECF subfamily; ECF26 subgroup' from Phaeobacter inhibens DSM 17395

Subject, 180 a.a., RNA polymerase sigma factor from Paraburkholderia sabiae LMG 24235

 Score = 98.2 bits (243), Expect = 7e-26
 Identities = 61/165 (36%), Positives = 87/165 (52%), Gaps = 2/165 (1%)

Query: 13  MSPDQFKSEMIGLLPRLRRFALSLTRSGADADDLLQEACALALQKWQQYDPAQPLDRWMF 72
           MS     S +  +LPRL  FA  LT    DA+DL+Q  C  AL++  Q         WMF
Sbjct: 1   MSGADLSSLIPEMLPRLWAFAFRLTGDQHDAEDLVQRGCLRALERAHQLQAGTAPLSWMF 60

Query: 73  RVLRNLWVSEIRKRRVRQGAGVVPVEEATELAASGVSGADVAETTLTARQVQSRIADMDP 132
            ++ ++W +E+R R +R+ +     E   E  A  V      ET L   Q+   I  +  
Sbjct: 61  SIIHSIWNNELRARSIRRRSSFEWDENFLENLADPVDNDP--ETRLMHAQIIGAIEQLPE 118

Query: 133 ALAQPLLLVCAEGYSYREVSELLDVPIGTVMSRIHRARKLLISSL 177
           A    +LL+  EG +YRE +++LDVPIGTVMSR+ RAR+ L S +
Sbjct: 119 AQRVVVLLIAVEGMTYREAADVLDVPIGTVMSRLSRARQALGSMI 163