Pairwise Alignments

Query, 185 a.a., 'RNA polymerase sigma-70, ECF subfamily; ECF26 subgroup' from Phaeobacter inhibens DSM 17395

Subject, 172 a.a., RNA polymerase sigma factor from Paraburkholderia sabiae LMG 24235

 Score = 81.6 bits (200), Expect = 7e-21
 Identities = 51/155 (32%), Positives = 85/155 (54%), Gaps = 3/155 (1%)

Query: 19  KSEMIGLLPRLRRFALSLTRSGADADDLLQEACALALQKWQQYDPAQPLDRWMFRVLRNL 78
           ++E++  +PRLRR+A +L  +   ADDL+Q+    AL + + ++    L  W+F ++ N+
Sbjct: 4   RNELMDHVPRLRRYARALISNRDLADDLVQDTLERALTRTKMFEAGSDLRAWLFTIMHNV 63

Query: 79  WVSEIRKRRVRQGAGVVPVEEATELAASGVSGADVAETTLTARQVQSRIADMDPALAQPL 138
           +V+++RK   R     V  E   E +   VSG      +L  R +   +  +     + +
Sbjct: 64  FVNQVRKSSSRAVHVSVDDESIVE-SEFAVSGEQT--RSLEVRDLDFALQRLPADQREVV 120

Query: 139 LLVCAEGYSYREVSELLDVPIGTVMSRIHRARKLL 173
           LLV  E  SY EV+  LD+P+GTVMSR+ R R+ L
Sbjct: 121 LLVGLEEMSYAEVAIALDIPVGTVMSRLSRGRERL 155