Pairwise Alignments

Query, 185 a.a., 'RNA polymerase sigma-70, ECF subfamily; ECF26 subgroup' from Phaeobacter inhibens DSM 17395

Subject, 171 a.a., sigma-70 family RNA polymerase sigma factor from Pectobacterium carotovorum WPP14

 Score =  107 bits (268), Expect = 9e-29
 Identities = 58/161 (36%), Positives = 94/161 (58%), Gaps = 5/161 (3%)

Query: 13  MSPDQFKSEMIGLLPRLRRFALSLTRSGADADDLLQEACALALQKWQQYDPAQPLDRWMF 72
           M+  + + ++   L RL R+ L L+RS   A++L+Q  C  AL+K  Q+ P   +D+W+F
Sbjct: 1   MTTSEVRQQLTTHLTRLWRYGLVLSRSHEVAEELVQSTCVRALEKSGQFTPGTRIDKWLF 60

Query: 73  RVLRNLWVSEIRKRRVRQGAGVVPVEEATELAASGVSGADVAETTLTARQVQSRIADMDP 132
            +L ++W+SE+R RRVR G G V   E+  L A      D  +  L  +++  R++ +  
Sbjct: 61  SILHSIWISELRARRVRLGQGFV---ESEALLAPDTHERD--DDRLHYQKIMQRVSALPE 115

Query: 133 ALAQPLLLVCAEGYSYREVSELLDVPIGTVMSRIHRARKLL 173
           A    + LV  EG++Y+E ++ L VPIGT+MSR+  AR  L
Sbjct: 116 AQRNTVFLVYVEGFTYQEAADTLSVPIGTIMSRLATARSTL 156