Pairwise Alignments

Query, 185 a.a., 'RNA polymerase sigma-70, ECF subfamily; ECF26 subgroup' from Phaeobacter inhibens DSM 17395

Subject, 178 a.a., ECF family sigma factor from Agrobacterium fabrum C58

 Score = 92.4 bits (228), Expect = 4e-24
 Identities = 56/168 (33%), Positives = 90/168 (53%), Gaps = 9/168 (5%)

Query: 18  FKSEMIGLLPRLRRFALSLTRSGADADDLLQEACALALQKWQQYDPAQPLDRWMFRVLRN 77
           F++EM+ L+P LRR++ SL+RS AD +DLLQ+    AL   +Q+     L  W + ++ N
Sbjct: 16  FETEMLALIPMLRRYSRSLSRSDADGEDLLQDCVEKALANKRQWR-GTGLKTWAYTIMTN 74

Query: 78  LWVSEIRKRRVRQGAGVVPVEEATELAASGVSGADVAETTLTARQVQSRIADMDPALAQP 137
           L+ +  R  +      +   E         ++  D    TL   ++   +A + P +   
Sbjct: 75  LYRNRHRAEKRHPSESLDGHET--------IAIPDTLSDTLENDRLHRALALLSPDMRAV 126

Query: 138 LLLVCAEGYSYREVSELLDVPIGTVMSRIHRARKLLISSLSHQEVAEL 185
           L+LV  EGYSY+E +E L +P+GTVMSR+ RAR+ L   L+   +  L
Sbjct: 127 LMLVTVEGYSYQEAAETLAIPLGTVMSRLSRARETLRQHLAEDNIIPL 174