Pairwise Alignments

Query, 185 a.a., 'RNA polymerase sigma-70, ECF subfamily; ECF26 subgroup' from Phaeobacter inhibens DSM 17395

Subject, 168 a.a., ECF family sigma factor from Agrobacterium fabrum C58

 Score = 90.5 bits (223), Expect = 1e-23
 Identities = 58/161 (36%), Positives = 89/161 (55%), Gaps = 11/161 (6%)

Query: 15  PDQFKSEMIGLLPRLRRFALSLTRSGADADDLLQEACALALQKWQQYDPAQPLDRWMFRV 74
           PD F  EM   +P LRR+A +LT     ADDL+Q+    A++K   + P  PL  W++RV
Sbjct: 2   PD-FLDEMTSCIPALRRYANALTHDRDTADDLVQDCLERAIRKKALWRPQGPLRPWLYRV 60

Query: 75  LRNLWVSEIR--KRRVRQGAGVVPVEEATELAASGVSGADVAETTLTARQVQSRIADMDP 132
           L N++ + +R  KRR +Q    +P+++ TE     V  A      L   ++   I  +  
Sbjct: 61  LVNVYRNNLRGSKRRPQQ----IPIDDVTEQLV--VPAAQTGRVALA--EMARAIEKLSG 112

Query: 133 ALAQPLLLVCAEGYSYREVSELLDVPIGTVMSRIHRARKLL 173
              + LLLV  EG +Y E + +L++P+GT+MSR+ RAR  L
Sbjct: 113 EHRETLLLVVVEGLTYAEAANILEIPLGTLMSRLGRARTAL 153