Pairwise Alignments

Query, 310 a.a., ABC-type phosphate/phosphonate transport system, periplasmic component from Phaeobacter inhibens DSM 17395

Subject, 289 a.a., Phosphonate ABC transporter substrate-binding protein PhnD (TC 3.A.1.9.1) from Variovorax sp. SCN45

 Score = 87.0 bits (214), Expect = 5e-22
 Identities = 81/284 (28%), Positives = 129/284 (45%), Gaps = 27/284 (9%)

Query: 33  RLWSMICVCLLVLMAPMAARADITLTFGTYAADKPTVTVKKYRPFLTFLSNRLGEALGEK 92
           RL   +   LL   A M A A   LT G   A+     ++  R  L  L  +LG      
Sbjct: 6   RLRRSLIALLLSTGAAMPALAVQPLTIGLIPAEDSQAMIESSRQVLDSLQQQLG------ 59

Query: 93  VVIRMTVAKEYQEGIDQLASGEVDFARFGPASYVHVMKQNPGIQI--VAMESKKGRKRFK 150
           + ++  VA +Y   I+ L + ++D A  GP SYV +  Q   ++   VA+  K G+  +K
Sbjct: 60  MPVKPFVATDYNGVIEALRAKKLDVAYLGPFSYV-LASQVADVEAFAVAVTKKTGQSSYK 118

Query: 151 GVIVVHRDSAITELSDLAGLSFAFGDELSTIGRYLAQSHLLEAGID-SGDLHTYDYLGRH 209
            VI+  +DS I + +DL G +FAF D  S  G    +S LL+AG D         + G H
Sbjct: 119 SVIIARKDSGIAKTADLKGRTFAFVDPTSASGHLFPKSGLLQAGHDPEAFFSRVIFSGSH 178

Query: 210 DLVGEAVGAGKFTAGALKESTYKKLIAKGVPIRVLASFDNVTKPWLASSDLPENVLLAMR 269
           D    AV   K  A ++ +      IAKG         D +   W +SS +PE+ ++  +
Sbjct: 179 DASILAVANKKVDAASVADRILASAIAKG-----QVKQDELEIVW-SSSPIPESPMVWRK 232

Query: 270 EI--MLSSENEEIVRRVSK---------NGFLQGSDSDYDLIRD 302
           ++   L ++  + +  V           NGF   +D+ Y+++RD
Sbjct: 233 DLDPALKAKIAKALANVKDLPWGDQGVLNGFQPTNDAAYNVVRD 276