Pairwise Alignments

Query, 285 a.a., putative transcriptional regulator, LysR type from Phaeobacter inhibens DSM 17395

Subject, 312 a.a., transcriptional repressor of flagellar, motility and chemotaxis genes from Escherichia coli BL21

 Score =  127 bits (318), Expect = 4e-34
 Identities = 79/258 (30%), Positives = 136/258 (52%), Gaps = 2/258 (0%)

Query: 3   NLDSDLLRTFLAVAEAGSVTDGAARIYRSQSATSLQVKRLEAILGQPVFERHGRGVVLSD 62
           NLD DLLRTF+AVA+  +    AA + R+QSA S Q++RLE ++G+ +F RHGR  +L++
Sbjct: 10  NLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTE 69

Query: 63  AGRRLLPVAQDVTARLDSALRDISLRDVSGKLRVGIPDDHGRTKLAEIIASFARHHPQVE 122
            G +LL  A+ +    D A   +   ++ G L +G  D+   T L  ++   +  +P++ 
Sbjct: 70  HGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLA 129

Query: 123 LDVTCALSTGFPDALEKGTLDLAIYEVERPRKHEEV-LFEDPTCWVSSAHRNFPSDDSLP 181
           LDV    +    + LE   +DL +    RP   + + L   PT W  +A       + +P
Sbjct: 130 LDVRVKRNAYMAEMLESQEVDLMV-TTHRPSTFKALNLRTSPTHWYCAAEYVLQKGEPIP 188

Query: 182 VAVFDQACWWRDVAIASLKTRGKPYRIVYSSQSVSGVIAAVEAGIAVGLLGRSSLHSGLS 241
           + + D    +RD+ +A+L     P+R+ Y + ++  V AAV+AG+ V       +   L 
Sbjct: 189 LVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLR 248

Query: 242 VMSNILGLGNTPASKLVM 259
           V+S + GL   P ++ ++
Sbjct: 249 VLSGVDGLPPLPDTEYLL 266