Pairwise Alignments

Query, 339 a.a., putative transcriptional regulator, AraC family from Phaeobacter inhibens DSM 17395

Subject, 326 a.a., putative transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score = 99.0 bits (245), Expect = 1e-25
 Identities = 83/296 (28%), Positives = 136/296 (45%), Gaps = 22/296 (7%)

Query: 52  RITLDQIFRLYQIAAVETGDEMMGL-WNRPIRARALQHLLTAVREASSLTSALYRFSTFW 110
           R   D + RL+Q+A   +G+E +GL   R +R  +   +  A+  + +L     R   + 
Sbjct: 18  RFPQDSMTRLWQLAVELSGNEAIGLNMARVVRPASFHVVGYALMSSRTLAEGFERLVRYQ 77

Query: 111 NLLLD--DYQFELHTRDDLVVLELRPIGDQVPQ-RFGHMLILKLAHGLMSWLVGHEVPVK 167
            ++ +  D  F L      ++L +   GD +P  R      L  A  L  WL G  V  +
Sbjct: 78  RIIAESSDLSFVLGPEGYSLILTVH--GDHLPPTRHSAEASLACALALCKWLSGRPVQPR 135

Query: 168 AVQFAFGCPEFAEDYATIFPASVDFGASYSSITFERTMFGPPHSRSKPEVIKFLRRAPRD 227
            V      P+  E Y   F + + FGA + ++ FER     P   +   +     R   +
Sbjct: 136 RVLVQGPQPKNVEPYKVAFHSPLVFGAPHDALVFERADMEAPLPTANEAMAVLHDRFAGE 195

Query: 228 WIFTSCWEHTQSLQIREFLYQSNWVDCQLVDA--------ARALRVTPRTLMRRLDADGT 279
           ++     E   S ++R+ L       C+++          A+AL ++ RTL RRL  +GT
Sbjct: 196 YLARFS-ESRVSHRVRQVL-------CRILPQGEPKRETLAQALHLSQRTLQRRLQEEGT 247

Query: 280 SFQAIKDGLRRDIAIRDLQSGQKSTEEISQDVGFSTAANFHRAFKRWTGATPSSYR 335
           SFQ + D  RR++A + L     +  E +  +GF+  +NF+RAF+RW  ATPS YR
Sbjct: 248 SFQTLLDDTRRELAEQYLAQPGMTLLETAYLLGFADPSNFYRAFRRWFDATPSEYR 303