Pairwise Alignments

Query, 239 a.a., putative transcriptional activator protein RaiR from Phaeobacter inhibens DSM 17395

Subject, 236 a.a., LuxR family transcriptional regulator from Pseudomonas simiae WCS417

 Score = 53.1 bits (126), Expect = 5e-12
 Identities = 45/182 (24%), Positives = 74/182 (40%), Gaps = 3/182 (1%)

Query: 56  YSQGWVERYQEKAYVRVDPVIIGCYQRFHPVDWRRLDWSSKPAREFLQDALAHDVGNQGY 115
           Y   W   Y +  +  +DPV+  C     PV W    +   P    L   L  +VG   +
Sbjct: 58  YPSEWSTLYDQAHFFDIDPVVQHCKTSVLPVVWEEKTFRDSPNLWSLAQTLGVNVG---W 114

Query: 116 SIPIRGPNGQFALFTVSHNCDDDTWTRFTDKHSRDLILIGHYFNRKALEFEPDRSPEHVQ 175
           +  +    G F++ T++ +  + +     +K  + L L        A ++          
Sbjct: 115 TQAVHDFRGVFSMLTLARSRHEVSPEELYEKAGQVLWLCHAIHAVVAQKYAASPDVIAAS 174

Query: 176 PLSPREIDALTLLAMGYSRAQVAKTLTISEHTLRVYIESARFKLGAINTTHAIARALSLG 235
            L+ RE + L   AMG + A +A  L +SE T+  +I S   KLG  N   A+  A   G
Sbjct: 175 TLTAREREVLKWSAMGKTAADIAAILCLSERTIGYHICSCFKKLGVNNKIAAVLCAARSG 234

Query: 236 LI 237
           +I
Sbjct: 235 II 236