Pairwise Alignments

Query, 239 a.a., putative transcriptional activator protein RaiR from Phaeobacter inhibens DSM 17395

Subject, 254 a.a., LuxR family transcriptional regulator from Pseudomonas simiae WCS417

 Score = 45.4 bits (106), Expect = 1e-09
 Identities = 48/191 (25%), Positives = 75/191 (39%), Gaps = 18/191 (9%)

Query: 60  WVERYQEKAYVRVDPVIIGCYQRFHPVDW-----------RRLDWSSKPAREFLQDALAH 108
           W   +  + + ++DPV         P  W           + +D    P   +L D    
Sbjct: 67  WHALWCSEGFYQIDPVQHLALSTVSPFVWSYDVKVDTPLQKIIDPCHAPVSSYLHDQEL- 125

Query: 109 DVGNQGYSIPIRGPNGQFALFTVSHNCDDDTWTRFTDKHSRDLILIGHYFNRKA--LEFE 166
                G S+PI  P G FA  T        +  +   +   D  LI H     A  L  +
Sbjct: 126 ---TCGVSVPIHLPRGGFASLTGLRTGKARSVLQDVQQTLSDFSLISHALQEAAYPLFSK 182

Query: 167 PDRSPEHVQPLSPREIDALTLLAMGYSRAQVAKTLTISEHTLRVYIESARFKLGAINTTH 226
             R+  H+  L+ RE + L   A G + A++A  L+ S   + +++ SA  KLGA N   
Sbjct: 183 ELRTYPHIH-LTKRERECLKWAADGLTAAEIATQLSRSLAVVTLHLASAMHKLGAKNRVQ 241

Query: 227 AIARALSLGLI 237
           A+ RA    L+
Sbjct: 242 AVVRATHYRLL 252