Pairwise Alignments

Query, 239 a.a., putative transcriptional activator protein RaiR from Phaeobacter inhibens DSM 17395

Subject, 245 a.a., LuxR family transcriptional regulator from Pectobacterium carotovorum WPP14

 Score = 57.4 bits (137), Expect = 3e-13
 Identities = 51/192 (26%), Positives = 83/192 (43%), Gaps = 11/192 (5%)

Query: 56  YSQGWVERYQEKAYVRVDPVIIGCYQRFHPVDWR-RLDWSSK-PAREFLQDALAHDVGNQ 113
           Y Q WV  Y+E  Y  +DPVI+    +  P  W   +  +SK    +    +  +D+ N 
Sbjct: 50  YPQEWVNTYKENNYQHIDPVILTAINKVSPFSWEDNIVINSKLKFSKIFNLSKEYDIVN- 108

Query: 114 GYSIPIRGPNGQFALFTV---SHNCDDDTWTRFTDKHSRDLILIGHYFNRKALEFEPDRS 170
           GY+  +   N   A  ++    H   D       +K    ++LI  +     L  E  +S
Sbjct: 109 GYTFVLHDNNNNLAALSIMFEEHAPTDMENIVEENKDKLQMLLIAVHEKITTLYKEMTQS 168

Query: 171 PE-----HVQPLSPREIDALTLLAMGYSRAQVAKTLTISEHTLRVYIESARFKLGAINTT 225
           P+       +  S RE + L   +MG +  ++A  L I   T++ +I +   KLG +N  
Sbjct: 169 PQSRKQGDKEIFSQRENEILYWASMGKTYPEIALILDIKISTVKFHIGNVVKKLGVLNAK 228

Query: 226 HAIARALSLGLI 237
           HAI   + L LI
Sbjct: 229 HAIRLGVELQLI 240