Pairwise Alignments

Query, 518 a.a., putative ATP dependent DNA ligase from Phaeobacter inhibens DSM 17395

Subject, 560 a.a., ATP-dependent DNA ligase from Paraburkholderia sabiae LMG 24235

 Score =  318 bits (814), Expect = 4e-91
 Identities = 214/556 (38%), Positives = 294/556 (52%), Gaps = 39/556 (7%)

Query: 1   MQAFAELLEQLAFTPSRNGKIAHLTTAFATIPDPERGYALAAITGDLALRNVTPSLLRGL 60
           M+ FA L   L  T S   K+  L T F   P  +  +A   + G    ++V   LL  +
Sbjct: 1   MKRFATLYTALDATTSTRDKLDALITYFHAAPPEDAAWASYFLAGGKPRQSVPTRLLTEI 60

Query: 61  VAEETD-PE-LFRLSYDFVGDLAETVALIWPHSDTVIDLSLTDAVHELTNTAKAQLPALI 118
                  PE LF  SY  VGDLAET+A + P +    +L LT  + E   T +   P  +
Sbjct: 61  ARTRAGLPEWLFEESYQAVGDLAETIAHVLPPAARTSELGLTQWIEERILTLRGASPETL 120

Query: 119 ARRL----SQMTPTQRYAYLKLATGGLRVGVSARLARSALAQFGDVDVTEIEELWHGLT- 173
             RL     ++  + R+   KL  GG RVGV+ +L   ALA+   VD   I +   G T 
Sbjct: 121 RERLIAYWDELDWSGRFLLTKLIGGGFRVGVARQLVVRALAEAAGVDHKLIAQRMVGWTD 180

Query: 174 ---PP----YLPLFAWLEGGEKPVNLAAA---------PFRPVMLSTGTDLEDLASLSPA 217
              PP    YL L A     +   + AA          P+ P  L+     +      P+
Sbjct: 181 SSQPPDAARYLRLIAPAPSADTQDDEAARIRHESELGLPY-PFFLAHPLQADPSTLGDPS 239

Query: 218 DFIAEWKWDGIRVQAVNDKGTRRLYSRTGEDISGSFPDVI---EALNFDGVLDGELLVKR 274
            + AEWKWDGIR Q V   G   ++SR  + I+  FP+V+   EAL    VLDGE+L   
Sbjct: 240 SWFAEWKWDGIRAQVVKRDGRVWVWSRGEDLITDRFPEVVALGEALPDGYVLDGEILAWE 299

Query: 275 GDSVAP--FGDLQKRLGRKKVGKAMLASHPAALRVYDVLYWNGEDLRPRTLADRQIHLKT 332
            +++AP  F  LQ R+ RK + K +LA  PA    YD+L  NG+DLR + L +R+  L T
Sbjct: 300 PNALAPLPFARLQPRITRKSLTKRVLAESPATFLAYDLLEANGDDLRMQPLQERRARLDT 359

Query: 333 CVCDLRDPR----IDLSLPLDFETWEDLAKLRADPPNSVIEGVMIKRRDSAYIAGRKR-- 386
               L D      + +S  +D   W  LA LR +     +EG+M+K R S Y  GR +  
Sbjct: 360 LGAQLADTLAKDLLRVSPLVDASDWNALAALRDESRARGVEGLMLKERASMYGVGRTKAA 419

Query: 387 GYWFKWKRDPMLVDAVMLYAQRGHGKRSGYYSDFTFGVWNDDQ----LVPVGKAYFGFTD 442
           G W+KWK DP  +DAV++YAQRGHG+R+  Y+DFTF VW++      LVP  KAY G TD
Sbjct: 420 GTWWKWKIDPYAIDAVLIYAQRGHGRRASLYTDFTFAVWDEADGVRTLVPFAKAYSGLTD 479

Query: 443 AELKELDRFVRNNTIDRFGPVRAVKPELVLEVAFEGLNESSRHKSGLAMRFPRINRIRTD 502
            E++E+D  VR  T+++FGPVR+V P LV E+ FEG+  S RHKSG+A+RFPR+ R RTD
Sbjct: 480 EEMREVDAIVRKTTVEKFGPVRSVTPTLVFEIGFEGIQASPRHKSGVAVRFPRMLRWRTD 539

Query: 503 KPALEAGTLAELRAFL 518
           K   +A TL  L+ F+
Sbjct: 540 KHIDDADTLVTLKGFI 555