Pairwise Alignments

Query, 518 a.a., putative ATP dependent DNA ligase from Phaeobacter inhibens DSM 17395

Subject, 541 a.a., ATP-dependent DNA ligase from Caulobacter crescentus NA1000 Δfur

 Score =  567 bits (1460), Expect = e-166
 Identities = 297/538 (55%), Positives = 374/538 (69%), Gaps = 20/538 (3%)

Query: 1   MQAFAELLEQLAFTPSRNGKIAHLTTAFATIPDPERGYALAAITGDLALRNVTPSLLRGL 60
           M+AFA LL++L+ T SRN K+  +       PDP+RGYALAA+TG L+     P+ +R  
Sbjct: 3   MRAFAHLLDRLSLTSSRNAKLILIQDHLRQTPDPDRGYALAALTGALSFNAAKPAFIRKA 62

Query: 61  VAEETDPELFRLSYDFVGDLAETVALIWPHSDTVIDLS------LTDAVHELTNTAKAQL 114
           +    DP+LF  SYDFVGDLAETV+L+WP   +   L       L++ +  L + ++ ++
Sbjct: 63  IEARMDPQLFAWSYDFVGDLAETVSLVWPAPSSRKWLGANRPPELSEVIDALHSASRPEV 122

Query: 115 PALIARRLSQMTPTQRYAYLKLATGGLRVGVSARLARSALAQFGDVDVTEIEELWHGLTP 174
             LI   L  + P  R+A LKL TGGLRVGVS+RLA+ A A  G VD+ EIEE+WH L P
Sbjct: 123 QRLIEGWLDALDPDGRWALLKLMTGGLRVGVSSRLAKQACANLGGVDIGEIEEIWHALAP 182

Query: 175 PYLPLFAWLEG-GEKPVNLAAAPFRPVMLSTGTDLE-DLASLSPADFIAEWKWDGIRVQA 232
           PY  LFAWLEG  E+P   A   FRPVML+   D E D   L PAD++AEWKWDGIRVQA
Sbjct: 183 PYGDLFAWLEGRSERPSPDAPGRFRPVMLAQPLDEEVDFQKLDPADYLAEWKWDGIRVQA 242

Query: 233 VNDKGTRRLYSRTGEDISGSFPDVIEALNFDGVLDGELLVKRGDSVAPFGDLQKRLGRKK 292
           V+++G RRLY+RTG+DIS SFPDV+EAL+F+G +DGELLV R  ++A FGDLQ+RL RK 
Sbjct: 243 VSERGERRLYTRTGDDISASFPDVVEALDFEGAIDGELLVLRDGALASFGDLQQRLNRKT 302

Query: 293 VGKAMLASHPAALRVYDVLYWNGEDLRPRTLADRQIHLKTCVCDLRDPRIDLSLPLDFET 352
           V   +LA+ PA +R YD+L     DLR      R+  L+  V  L+  RIDLS    F T
Sbjct: 303 VDAKLLAAFPAGIRAYDLLMDGETDLRALPFETRRARLEAFVASLKTSRIDLSPLQPFST 362

Query: 353 WEDLAKLRADPPNS---VIEGVMIKRRDSAYIAGRKRGYWFKWKRDPMLVDAVMLYAQRG 409
           W+ LA LR +PP     + EG+M+KRRDS Y  GR +G WFKWKRDP L+DAV++YAQRG
Sbjct: 363 WKALAALRLEPPEGDARLSEGLMLKRRDSVYEPGRPKGPWFKWKRDPRLIDAVLMYAQRG 422

Query: 410 HGKRSGYYSDFTFGVWNDDQ-----LVPVGKAYFGFTDAELKELDRFVRNNTIDRFGPVR 464
           HGKRS +YSD+TFGVW +D+     L PVGKAYFGFTD ELK++D+FVR++TI+RFGPVR
Sbjct: 423 HGKRSSFYSDYTFGVWREDEDGRRTLTPVGKAYFGFTDEELKQIDKFVRDHTIERFGPVR 482

Query: 465 AVKPE----LVLEVAFEGLNESSRHKSGLAMRFPRINRIRTDKPALEAGTLAELRAFL 518
           +V+ +    L+ EVAFEGL  SSRHKSG+AMRFPRINRIR DKPA EA  LA L A L
Sbjct: 483 SVRADADVGLIFEVAFEGLQRSSRHKSGVAMRFPRINRIRWDKPAREADELATLEAML 540