Pairwise Alignments

Query, 288 a.a., ABC transporter, inner membrane component from Phaeobacter inhibens DSM 17395

Subject, 311 a.a., dipeptide transport system permease protein DppC from Phaeobacter inhibens DSM 17395

 Score =  209 bits (532), Expect = 6e-59
 Identities = 115/293 (39%), Positives = 169/293 (57%), Gaps = 10/293 (3%)

Query: 4   ATLLSPEATRPQQSR-------WQIALRKPGFMIGVAIIAVSTLLAIAPGLFAPYDPNFI 56
           A LL+   T  +Q+R       W    +    M+G+ I+ +   +A+   + AP+DP ++
Sbjct: 16  AWLLTDTPTSRRQARLAALYQGWLSLRQNHMAMVGLGILILLISIALLAPVIAPHDP-YV 74

Query: 57  DYNAVRQPP--SWAHPFGTDMLGRDSLSRVISAYSVNMQMAVLATVFAMLIGVTIGALVG 114
              A R  P  S  H  GTD LGRD LSR+I    + + +  L  + A + G+ +G + G
Sbjct: 75  QNLANRLQPLGSEGHILGTDSLGRDILSRLIHGARITLYIVALVAMIAPIAGLLVGTVSG 134

Query: 115 YYRGIADMIFGRVVDAVITFPFLVLVIAVVAVLGPGLINMYIAITVVGWVYYARLMRAEV 174
           Y  G AD+I  R+ D  + FP LVL +A VA LG G+ N  +AI++  W  YAR+ RAE 
Sbjct: 135 YVGGWADIILMRITDIFLAFPRLVLALAFVAALGAGIENAVLAISLTAWPPYARMARAET 194

Query: 175 ITQMGNDYASAGVVMGYSDRRVIFRHLLPNAITPVIVYWMTDMSLAILLGSSLGYLGLGA 234
           +T   +DY SA  + G    R+I +H+ P  ++ +IV    DM+  IL  + LG+LGLGA
Sbjct: 195 LTIRSSDYISAIRLQGAGPLRIIIKHIWPLCVSSLIVRVTLDMAGIILAAAGLGFLGLGA 254

Query: 235 QPPQAEWGVLIAEGRNFITTAWWLSLMPGIAIVLTGIGFSLIGDGLADLLRPR 287
           QPP  EWG +I+EGR FI   WW++ MPG+AI    + F+L+GDGL D+L P+
Sbjct: 255 QPPSPEWGAMISEGRRFILDHWWVATMPGLAIFAVSLAFNLLGDGLRDVLDPK 307