Pairwise Alignments

Query, 386 a.a., putative amino acid binding protein from Phaeobacter inhibens DSM 17395

Subject, 388 a.a., Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  157 bits (397), Expect = 5e-43
 Identities = 111/369 (30%), Positives = 167/369 (45%), Gaps = 4/369 (1%)

Query: 6   LTTAAVLALAVPSLGLAEQGVSSTEVRFAQVAALDGPAAALGQGMQLGLEAAFAEANAAG 65
           LT AAVLALA        QGVS  E+    +  L GP A  G+ +++G+     E N  G
Sbjct: 5   LTAAAVLALAAGPALAQTQGVSKDEIVIGSIQDLSGPIAGFGKQVRMGMLLRVDEINEQG 64

Query: 66  GVHGRNIVLDSMDDSYEPDKSVALVKQVIADNQHIGLIGAVGTPTASATQPIATEAGLPF 125
           G++GR I L   D  Y+P  +V   ++++  ++   ++G +GT    A  P+  +  +  
Sbjct: 65  GINGRKIKLLVEDSKYDPRNAVLAAQKLVNQDKIFAMVGHIGTAQNMAAMPVQFQKNVLN 124

Query: 126 IGPFTGAGFLRDASHGNILNVRATYAAETEAWIAHLVDEQNMKSIALLYQDDGFGRVGLA 185
             P T A  + D  H    +  ATY  +    +  L  E+  K +  +YQDD FG     
Sbjct: 125 FYPITAARQMYDPFHKLKYSFAATYYDQMRIVVPMLAKEKGAKKVCAMYQDDEFGLEVKR 184

Query: 186 GVTAALEKRGMTLVAEGTYTRNTTAVKKALLTIRKAKPDAVVMVGAYKPVAEFIKLSRKL 245
           G    L+  GMTL AE TY R  T     +  ++  + D VVM    +     I  +++L
Sbjct: 185 GAEDGLKTAGMTLAAETTYKRGATDFASQMQKLQADQCDLVVMGTIIRETIGGIATAKRL 244

Query: 246 KFNPTFVNISFVGSDALAKELGDAGEGVIISQVVPFPWDQSLPVVAQYQAALKAVDADAE 305
            FNPTFV  S   +D + K  G A  G   +  V  P+  S     ++ A       + E
Sbjct: 245 GFNPTFVGSSAAYTDLIHKLGGPAMNGFYAAMTVQHPYLDSASQPLRFWANKYQTKFNEE 304

Query: 306 PGFVTLEGYLTGRLAIRALEDAGADLTRDSYLAAMAGLR---DVDFGGVTMRFGPDDNQG 362
           P   ++ GY +    IRA   AG  LT +S++ AM  ++   D+ FG   M F P    G
Sbjct: 305 PTVFSVYGYGSIDAFIRAATKAGPGLTTESFIKAMDTMKIPPDI-FGSAEMSFSPTKRLG 363

Query: 363 MDDVFLTHI 371
                L+ I
Sbjct: 364 SSATRLSQI 372