Pairwise Alignments

Query, 252 a.a., lipopolysaccharide export system ATP-binding protein LptB from Phaeobacter inhibens DSM 17395

Subject, 241 a.a., lipopolysaccharide ABC transporter, subunit LptB from Pseudomonas putida KT2440

 Score =  265 bits (676), Expect = 8e-76
 Identities = 136/238 (57%), Positives = 173/238 (72%), Gaps = 1/238 (0%)

Query: 15  LRIEKLRKSYSKKVVIRDVSMSLDRGEVVALLGPNGSGKTTSFYAIAGLVFPEAGSVTID 74
           L+ + L KSY  + V+RDVS+S+D G++V LLGPNG+GKTT FY I GLV  E G V ID
Sbjct: 4   LKAQHLAKSYKGRQVVRDVSLSIDSGQIVGLLGPNGAGKTTCFYMIVGLVQAEQGRVLID 63

Query: 75  GQNATTLPMYRRARMGIGYLPQEMSIFRGLSVEDNISSVLDIAVK-HAHKRRERLEELLS 133
             + +  PM+ RAR GIGYLPQE SIFR LSV DNI ++L+         RR+ LE LL 
Sbjct: 64  NLDVSHQPMHGRARAGIGYLPQEASIFRKLSVADNIMAILETRKDLDRDGRRKELESLLQ 123

Query: 134 DFSIEHLRRAPALALSGGERRRVEIARCLAADPKYLLLDEPFAGVDPISVGDIRHLVGDL 193
           +F I H+R    ++LSGGERRRVEIAR LA  PK++LLDEPFAGVDPISVGDI+ ++  L
Sbjct: 124 EFHISHIRDNLGMSLSGGERRRVEIARALATAPKFILLDEPFAGVDPISVGDIKQIIHHL 183

Query: 194 KKRGIGVLITDHNVRETLEIVDRAYILHDGKVLMSGTPAEVVDNENVRRVYLGDNFRI 251
           K +GIGVLITDHNVRETL+I + AYI++DG+++  G    ++ NE V+ VYLG  FR+
Sbjct: 184 KAKGIGVLITDHNVRETLDICETAYIVNDGRLIAEGDAETILANELVKEVYLGHEFRL 241