Pairwise Alignments

Query, 516 a.a., Uncharacterized protein related to deoxyribodipyrimidine photolyase from Phaeobacter inhibens DSM 17395

Subject, 508 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score =  525 bits (1352), Expect = e-153
 Identities = 266/489 (54%), Positives = 328/489 (67%), Gaps = 3/489 (0%)

Query: 15  RIILILGDQLSHDLPSLQVGDPQKDRLLMAEVAEEASYVPHHKKKLAFVLSAMRHFADEL 74
           R+ L+LGDQLS DL SL   DP +D +LMAEV  EA YVPHH  K+  + SAMRHFA  L
Sbjct: 2   RLGLVLGDQLSFDLASLASLDPARDAVLMAEVEGEARYVPHHPLKIVLIFSAMRHFAQAL 61

Query: 75  TAAGWDLKYVHLDDPDNSGSLTGELDRALEQFTVTEVLVTEPGEYRLKEALNRWSGPARL 134
              GW + YV LD   NSGS+ GEL R  +    T + +TE GE+RL++AL   + P  L
Sbjct: 62  RERGWQVHYVELDAEGNSGSIVGELHRWQQALGATHIHLTECGEWRLEQALRDAALP--L 119

Query: 135 TMLDDSRFLASHDMFRSWAEGRKQLRMEYFYRDMRRKTGLLMQGD-SPEGGKWNYDTENR 193
               D+RFL S + F  WA  R+QLRME+FYR MR++TGLLM+ D SP GG WN+D +NR
Sbjct: 120 VWFRDTRFLCSREAFGRWATERRQLRMEHFYRGMRKRTGLLMEPDGSPAGGAWNFDGDNR 179

Query: 194 KPAQNDMFMPKPMRCDPDRITQDVLELVEQRFPGNFGRLTPFWFAVTRAAALKALDHFID 253
           KP    +  P       D IT  V+ LV QRF  ++G +  F + VT A A +   HF+D
Sbjct: 180 KPLPRQLRGPFAAHFAQDDITAAVVALVRQRFSDHYGGVDGFDYPVTHAEAQQLWQHFLD 239

Query: 254 VALPLFGDYQDAMLDGEPFLYHSLLSQYINIGLLNPLEVCRSAERAYYEGHAPLNAVEGF 313
             L  FGDYQDAM +GEP+L+H+ +S  +NIGLL+   +C   ++A+ EG  PLNA EGF
Sbjct: 240 FGLAAFGDYQDAMAEGEPYLFHARISAALNIGLLDVRRLCDDVDKAWREGRVPLNAAEGF 299

Query: 314 IRQIIGWREYMRGIYWLKMPGYTRENALGAKRDLPDFYWSGETGMACMAAAITQTRDEAY 373
           IRQ+IGWREY+RGIYW +MP Y   N L   R LP+FYW+G T M CMA AI QT    Y
Sbjct: 300 IRQLIGWREYVRGIYWQRMPAYAGLNHLNNHRALPEFYWTGRTRMRCMAQAIGQTLRLGY 359

Query: 374 AHHIQRLMVTGNFAMLAGINPHQVHEWYLAVYADAYEWVEAPNVIGMSQFADGGLLGSKP 433
           AHHIQRLMVTGNFA+LAGI P  + EWYLAVY DA+EWVE PN +GM   ADGG LGSKP
Sbjct: 360 AHHIQRLMVTGNFALLAGIVPTAICEWYLAVYMDAFEWVELPNTLGMVMHADGGYLGSKP 419

Query: 434 YAASGNYINKMSNYCTTCAYDVKQKTGPKACPFNPLYWDFLIRNREKLSKNPRLMQPYRT 493
           Y ASG YI +MS++C  C+Y V Q T  +ACPFN LYW FLIR+R +LS NPRL   YR+
Sbjct: 420 YCASGRYIQRMSDHCKACSYRVDQVTEEEACPFNALYWHFLIRHRPQLSANPRLALVYRS 479

Query: 494 WDRMSAEKQ 502
            D M A ++
Sbjct: 480 LDGMPAGRR 488