Pairwise Alignments

Query, 516 a.a., PAS domain-containing protein from Phaeobacter inhibens DSM 17395

Subject, 609 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score = 44.7 bits (104), Expect = 1e-08
 Identities = 39/173 (22%), Positives = 74/173 (42%), Gaps = 11/173 (6%)

Query: 253 RNFVQTLAKTFAQLSIGLAIFDRNRQLVLFNPVLIDLTALPAN-FLSSRPNL--LTFFDR 309
           R+ +Q++      L  G+ +FD+N +++  N +   L   P   F  S P++  L  F+ 
Sbjct: 9   RHIIQSIID---HLPCGVTLFDQNLEMIACNGLFRRLLDFPDQLFEGSLPSMKSLAMFNA 65

Query: 310 LRDQRMMPEPKNYSSWRHQMADLLEAAAEGRYQETWSLPSGSVYSVSGRPHPDGAIAFLF 369
            R +    +P+  +    Q A  ++     R +     P G++  +SG+P P G    L+
Sbjct: 66  RRGEYGPGDPEELAGQVVQRAMAMKPHQFERVR-----PDGTILEISGQPLPSGGFITLY 120

Query: 370 EDITAEITLTRQFRSELEMGQSIMDQMDEAIAVFANDGTMTFSNAAYHDLWQM 422
            DIT         R +  + + I D    AI    + G +  +N    +++ M
Sbjct: 121 TDITERREAEETLRDKEGLLRLIFDNSSVAIFTIDSSGRIGAANQRMAEMFMM 173