Pairwise Alignments

Query, 423 a.a., spermidine/putrescine transport system permease protein PotB from Phaeobacter inhibens DSM 17395

Subject, 415 a.a., ABC transporter permease from Pseudomonas fluorescens SBW25

 Score =  347 bits (889), Expect = e-100
 Identities = 188/407 (46%), Positives = 263/407 (64%), Gaps = 9/407 (2%)

Query: 18  LKRSLARALRMQKIRALMLIAPLLLFVLLTFILPIADMLFRSVENKIVSDTLPKTVVALK 77
           LK+ LARA R+ + +A  LIAPL+LF+LL F++PI  +L++SV N  V   LP+TVVA+ 
Sbjct: 15  LKQRLARAERLNRWKAQALIAPLVLFLLLVFLVPIVALLYKSVGNPEVVGGLPRTVVAVT 74

Query: 78  DWDANSGETPDEAIFAALAADLQVAAQEKTHTRVGSRLNYENPGISSLFRKAGRKVKRWD 137
            WD      P E ++ AL+ DL  A + +T   +  RLN E  G  SL  K  R +   +
Sbjct: 75  AWDGRG--LPGEPVYQALSEDLGEARKNQTLGDLSKRLNMELAGYRSLLTKTARALPFSE 132

Query: 138 LAEDGPFREQFIKIDEDWADPEVWRTIQTYSGAYTNGYFLNAADFQKGAEGAELRPE--N 195
                 ++E    +DE W DP  W+ I+  + + T  Y L A D +    G E+ P   +
Sbjct: 133 APAS--YKEALENLDERWGDPAYWQAIRRNTSSLTPFYLLAAVDHRIDDLG-EVAPATPD 189

Query: 196 ERIYGTLFLRTLIMSLAITVSCIVLGYPVAWILANLPSRTANLLMILVLLPFWTSLLVRT 255
           + IY  +F RT  M L IT  C++L YP+A++LANLP+R +NLLMILVLLPFWTS+LVR 
Sbjct: 190 QAIYLDIFARTFWMGLVITAICLLLAYPLAYLLANLPARKSNLLMILVLLPFWTSILVRV 249

Query: 256 SAWKVMLQQQGVINDTLVWLGLVADDARLVMINNQFGTIVAMTHILLPFMILPMYSVMQT 315
           +AW V+LQ  G+IN  ++ LGL+     LV   N+ G  ++M HILLPFMILP+YSVM+ 
Sbjct: 250 AAWIVLLQSGGLINSAMMSLGLIDKPVELVF--NRTGVYISMVHILLPFMILPIYSVMKG 307

Query: 316 INPSYLRAAKSLGATNWTAFWRVYFPQSVPGIGAGSILVFILAIGYYITPELVGGTKGVF 375
           I+P+Y+RAA SLG   + +FWRVYFPQ+  G+GAG +LVFILAIGYYITP L+G      
Sbjct: 308 ISPTYMRAAISLGCHPFASFWRVYFPQTYAGVGAGCLLVFILAIGYYITPALLGSPNDQM 367

Query: 376 ISNRIAFHISQSLNWGLAAALGSILLVVVLALYWAYDKIVGIDNVKL 422
           +S  +AF+ + S+NWG+A ALG +LL+  + LY  Y+++VG   ++L
Sbjct: 368 VSYFVAFYTNTSINWGMATALGGLLLLATVVLYLIYNRLVGASRLRL 414