Pairwise Alignments

Query, 423 a.a., spermidine/putrescine transport system permease protein PotB from Phaeobacter inhibens DSM 17395

Subject, 593 a.a., ABC transporter permease subunit from Paraburkholderia sabiae LMG 24235

 Score =  150 bits (380), Expect = 8e-41
 Identities = 82/244 (33%), Positives = 140/244 (57%), Gaps = 3/244 (1%)

Query: 177 LNAADFQKGAEGAELRPENERIYGTLFLRTLIMSLAITVSCIVLGYPVAWILANLPSRTA 236
           L +AD Q G    E R     +Y  +   T  +S       I+LGYPVA++L+ L  R  
Sbjct: 54  LVSADGQIGFAQFE-RIARTPVYAKVLWITFAISFLTAALSILLGYPVAYMLSRLSERVR 112

Query: 237 NLLMILVLLPFWTSLLVRTSAWKVMLQQQGVINDTLVWLGLVADDARLVMINNQFGTIVA 296
              ++ ++LPFWTS LV+T AW ++L + GV++   + LGLV + +    I +  G ++ 
Sbjct: 113 ERWLLWIMLPFWTSYLVKTYAWMLLLSKTGVLSTIALSLGLVHETSGT--IPSLTGVLIG 170

Query: 297 MTHILLPFMILPMYSVMQTINPSYLRAAKSLGATNWTAFWRVYFPQSVPGIGAGSILVFI 356
           M H +LP  ++ M  VM+ I+    +AA++LGA   T+F+ V+ P S PG+ A  +LVFI
Sbjct: 171 MVHSMLPLAVMTMLPVMRGIDDRLAQAAETLGAERSTSFFTVFLPLSSPGVAAAGLLVFI 230

Query: 357 LAIGYYITPELVGGTKGVFISNRIAFHISQSLNWGLAAALGSILLVVVLALYWAYDKIVG 416
            ++G++I P L+G  K   I+  +   + +  +   A AL ++LLV  + +++ YD++VG
Sbjct: 231 SSLGFFIVPALLGSPKETMIAQLVISSVLELFDMRFAGALSTVLLVCSIVIFFVYDRMVG 290

Query: 417 IDNV 420
           + ++
Sbjct: 291 LTSL 294



 Score = 40.0 bits (92), Expect = 2e-07
 Identities = 38/210 (18%), Positives = 86/210 (40%), Gaps = 21/210 (10%)

Query: 198 IYGTLFLRTLIMSLAITVSCIVLGYPVAWILANLPSRTANLLMILVLLPFWTSLLVRTSA 257
           ++ +  +R+  + L   +  ++LG+     +  +P R +  +  L++ P           
Sbjct: 392 VWRSAIIRSFEVGLGTALLSLLLGFGATLAMTRMPRRASKPMFALLVAPL---------- 441

Query: 258 WKVMLQQQGVINDTLVWLGLVADDARLVMINNQFGTIVAMTHILLPFMILPMYSVMQTIN 317
                    ++   +V +GL+    RL +     G IV  T + +P++++ + +  Q  +
Sbjct: 442 ---------IVPRIVVAVGLLYLFGRLGLTGTNLGLIVGHTVLAIPYVVVTLAAGFQRFD 492

Query: 318 PSYLRAAKSLGATNWTAFWRVYFPQSVPGIGAGSILVFILAIGYYITPELVGGTKGVFIS 377
                AA+ +GA+       V  P  +  + A  +  F+++         V G     + 
Sbjct: 493 WRLDDAARVMGASPLRRITSVVLPLLMASVTAAFLFAFLVSFDDLTIAIFVSGGINSTLP 552

Query: 378 NRIAFHISQSLNWGLAAALGSILLVVVLAL 407
            ++   I  ++   LAA   S  LV+++AL
Sbjct: 553 KQMWDDIQLAITPTLAAV--STTLVILIAL 580