Pairwise Alignments

Query, 314 a.a., putative HTH-type transcriptional regulator, AraC family from Phaeobacter inhibens DSM 17395

Subject, 319 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score = 91.3 bits (225), Expect = 3e-23
 Identities = 66/212 (31%), Positives = 109/212 (51%), Gaps = 10/212 (4%)

Query: 109 VLAGFDTGAWLLAAAGLLDGYRATIHSSEMEAFADMFPAVQAETHR-FLWDRDRLTSSGA 167
           VL G   G+ +LA +GLLDG  AT H S  ++FA  +PAV+ E  +  + D D +T++G 
Sbjct: 105 VLGGVCIGSIMLARSGLLDGRSATTHWSSAKSFAARYPAVRLEADKPIVDDGDLITTAGL 164

Query: 168 MAAFDGILDMIAQQHGQALRLDVAALFLSE-----SQSGSDRSSPVRS---ASVARAIRA 219
           MA  +  L ++ +  G ++  D A   + E     SQ GS+  +P+     A++ +    
Sbjct: 165 MAWSELGLRLVDRLMGPSIAADTARFLVIEHSDSASQCGSN-FAPILGHGDAAILKVQHW 223

Query: 220 MEANLETPLPLEEVARHAGRSLRDLARRTRGELGTTPQALYRHLRLKQAKRLVLETDFSV 279
           ++A+    + L  +AR AG   R   RR R   G  P    +HLR+ +A++++  T+ ++
Sbjct: 224 LQASGAVDVSLAAMAREAGLEERTFLRRFRNATGLKPTEYCQHLRVGKARQMLEFTNGTI 283

Query: 280 AEIAVRCGYEDPSALTRAFRSAFATTPRALRA 311
             IA   GY+DPSA    F+      P   R+
Sbjct: 284 DHIAWTVGYQDPSAFRATFKKITGLAPSDYRS 315