Pairwise Alignments

Query, 314 a.a., putative HTH-type transcriptional regulator, AraC family from Phaeobacter inhibens DSM 17395

Subject, 328 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score = 98.6 bits (244), Expect = 2e-25
 Identities = 65/216 (30%), Positives = 108/216 (50%), Gaps = 12/216 (5%)

Query: 105 QRYGVLAGFDTGAWLLAAAGLLDGYRATIHSSEMEAFADMFPAVQAETHR-FLWDRDRLT 163
           +R+G +    TG +LL  AGLL+GYR T H + +E  A  FP  + ET + ++ DR  +T
Sbjct: 107 KRFGAIC---TGVFLLGRAGLLNGYRCTTHWNYVERLAQAFPEAKVETEQIYVMDRCLIT 163

Query: 164 SSGAMAAFDGILDMIAQQHGQALRLDVAALFL--SESQSGSDRSSPVRSA------SVAR 215
           S G  A  D  L ++A+ HG+AL L+VA + L     Q G     P+ +A       +AR
Sbjct: 164 SGGITAGIDLALAVVAEDHGKALALEVAKVLLVARHRQGGQTPYGPLLAAVPRDDSPIAR 223

Query: 216 AIRAMEANLETPLPLEEVARHAGRSLRDLARRTRGELGTTPQALYRHLRLKQAKRLVLET 275
               +  ++E    ++++A     S R+ AR    E+G TP    ++ R+ + ++L+   
Sbjct: 224 VQAYIVDHIEQAFTVQKMAELVAMSGRNFARTFLREVGITPLQYLQNARIDRTRKLLECG 283

Query: 276 DFSVAEIAVRCGYEDPSALTRAFRSAFATTPRALRA 311
           D  +  +A +CG+     + + F      TP   RA
Sbjct: 284 DLPMKVVAAQCGFGSDRHMRKVFFERIGMTPAQYRA 319